当前解析结果
SmilChr08G000796| 统一新 Gene ID | SmilChr08G000796 |
|---|---|
| 名称 | SmilChr08G000796 |
| 描述 | receptor-like protein kinase ANXUR2 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 5847768 - 5850608 / - |
| NCBI Gene ID | LOC130997985 |
|---|---|
| GeneID | 130997985 |
| locus_tag | - |
| NCBI Name | LOC130997985 |
| 原始查询 | SmilChr08G000796 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | receptor-like protein kinase ANXUR2 |
| 产物 | receptor-like protein kinase ANXUR2 |
| Arabidopsis | AT5G28680 (ANX2)Malectin/receptor-like protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:832975] identity=53.5; qcov=0.963; evalue=0; confidence=high |
| Rice | Os05g0280700 (YK11)- identity=56.8; qcov=0.939; evalue=0; confidence=high |
| GO | GO:0004714 (transmembrane receptor protein tyrosine kinase activity); GO:0005524 (ATP binding); GO:0005886 (plasma membrane); GO:0009506 (plasmodesma); GO:0046777 (protein autophosphorylation) |
| KEGG | - |
| Pfam | PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr); PF12819 (Malectin_like) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997985 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057779406.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057779406.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057779406.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057779406.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057779406.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:5847833 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B18,C81,C85 |
Chr8:5847899 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr8:5847904 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B133,B66,B8 |
Chr8:5847927 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B37,B71,B74,C6,C73 |
Chr8:5847932 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B5,C77 |
Chr8:5847954 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A1,B107 |
Chr8:5848055 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr8:5848059 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B37,B71,B74,C6,C73 |
Chr8:5848099 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr8:5848115 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr8:5848176 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr8:5848209 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057779406.1PF12819
Malectin_like 33-400 aa
PF00069
Pkinase 530-794 aa
PF07714
PK_Tyr_Ser-Thr 532-794 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057779406.1 |
Pfam | PF12819 |
Malectin_like | Domain | 33 | 400 | 1.4e-23 | 84.5 | Malectin-like domain |
XP_057779406.1 |
Pfam | PF00069 |
Pkinase | Domain | 530 | 794 | 1.4e-42 | 146.6 | Protein kinase domain |
XP_057779406.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 532 | 794 | 8.3e-47 | 160.4 | Protein tyrosine and serine/threonine kinase |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。