Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000926`

染色体: Chr08 坐标: 6838115-6840794 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000926`
名称	SmilChr08G000926
描述	uncharacterized SmilChr08G000926
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	6838115 - 6840794 / `+`

ID 对照

NCBI Gene ID	`LOC131000510`
GeneID	`131000510`
locus_tag	`-`
NCBI Name	`LOC131000510`
原始查询	`SmilChr08G000926`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:828074]; symbol=AT4G03115; hit=AT4G03115; species=arabidopsis; confidence=high
产物	Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:828074]; symbol=AT4G03115; hit=AT4G03115; species=arabidopsis; confidence=high
Arabidopsis	`AT4G03115` (AT4G03115) Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:828074] identity=58.2; qcov=0.916; evalue=3.53e-121; confidence=high
Rice	`Os12g0533800` - identity=59.2; qcov=0.614; evalue=5.18e-66; confidence=high
GO	GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:131000510

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057782434.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057782434.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057782434.1`
4	Nucleus	细胞核	0.00000	`XP_057782434.1`
5	Chromosome	染色体	0.00000	`XP_057782434.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:6839041`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C57
`Chr8:6839150`	`TCC`	`T`	2bp_deletion	frameshift_variant	1	B81
`Chr8:6839150`	`TCC`	`T`	2bp_deletion	CDS_variant	1	B81
`Chr8:6839352`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A25,B113,B37,C44
`Chr8:6839609`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C12
`Chr8:6840048`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B49

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057782434.1

318 aa

159

318

Mito_carr

PF00153 Mito_carr 36-118 aa PF00153 Mito_carr 131-216 aa PF00153 Mito_carr 224-313 aa

XP_057782435.1

311 aa

156

311

Mito_carr

PF00153 Mito_carr 29-111 aa PF00153 Mito_carr 124-209 aa PF00153 Mito_carr 217-306 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057782434.1`	Pfam	`PF00153`	Mito_carr	Repeat	36	118	4.7e-65	216.1	Mitochondrial carrier protein
`XP_057782434.1`	Pfam	`PF00153`	Mito_carr	Repeat	131	216	4.7e-65	216.1	Mitochondrial carrier protein
`XP_057782434.1`	Pfam	`PF00153`	Mito_carr	Repeat	224	313	4.7e-65	216.1	Mitochondrial carrier protein
`XP_057782435.1`	Pfam	`PF00153`	Mito_carr	Repeat	29	111	4.2e-65	216.2	Mitochondrial carrier protein
`XP_057782435.1`	Pfam	`PF00153`	Mito_carr	Repeat	124	209	4.2e-65	216.2	Mitochondrial carrier protein
`XP_057782435.1`	Pfam	`PF00153`	Mito_carr	Repeat	217	306	4.2e-65	216.2	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057926451.1
TAGAAGTCCATAATTGTGGGGTGGACCTTGCTTACAGTTAAATGAAATGCATTTAATTATTGAAACGTTTTCCATAAAGTCTGGTGCCACTACCATTCTTCTCCTCCTTCTGCTACCTCACACTCGATCGAATTGCCCATGGCAAACGCTCTCGAACTGCCGGTGCCTGACACCTCCTCTGGTAACTATCATCAACCATGCTTTGGATCAGAGAAAGCAACATGGGTAGCATCTCCATCCTATGCATTTTATCATTTCGG...

XM_057926452.1
AAGTCCATAATTGTGGGGTGGACCTTGCTTACAGTTAAATGAAATGCATTTAATTATTGAAACGTTTTCCATAAAGTCTGGTGCCACTACCATTCTTCTCCTCCTTCTGCTACCTCACACTCGATCGAATTGCCCATGGCAAACGCTCTCGAACTGCCGGTGCCTGACACCTCCTCTGTTGGATCAGAGAAAGCAACATGGGTAGCATCTCCATCCTATGCATTTTATCATTTCGGCACCAGCGGGGCGGCGGTTGCTGC...

CDS

2 records

下载 CDS FASTA

LOC131000510
ATGGCAAACGCTCTCGAACTGCCGGTGCCTGACACCTCCTCTGGTAACTATCATCAACCATGCTTTGGATCAGAGAAAGCAACATGGGTAGCATCTCCATCCTATGCATTTTATCATTTCGGCACCAGCGGGGCGGCGGTTGCTGCTGCTTCCACCGTCACTCATCCTTTAGATCTTCTAAAGGTTAGGCTGCAAATGCAAATGGTTGGCCAAAGAGGCCCGCTGATCGGCATGAGACAACTTGGCATAAACTTAGTGAA...

LOC131000510
ATGGCAAACGCTCTCGAACTGCCGGTGCCTGACACCTCCTCTGTTGGATCAGAGAAAGCAACATGGGTAGCATCTCCATCCTATGCATTTTATCATTTCGGCACCAGCGGGGCGGCGGTTGCTGCTGCTTCCACCGTCACTCATCCTTTAGATCTTCTAAAGGTTAGGCTGCAAATGCAAATGGTTGGCCAAAGAGGCCCGCTGATCGGCATGAGACAACTTGGCATAAACTTAGTGAAGAATGAAGGACTGAGGGCCTT...

Protein

2 records

下载 Protein FASTA

XP_057782434.1
MANALELPVPDTSSGNYHQPCFGSEKATWVASPSYAFYHFGTSGAAVAAASTVTHPLDLLKVRLQMQMVGQRGPLIGMRQLGINLVKNEGLRALYMGLTPGLVRSLFYGGLRLGLYEPSLRLSEMAFGSPNILTKVVVGAFSGALATAVTNPVEVLKVRMQMGRLTTKGPLQELRKMAAEEGLTGFWKGAGPEMTRAAVFTASQLATYDETKRLVMRWTSLEDGFYLHFIASTIAGGASTIATAPIDVVKTRLMLQRESK...

XP_057782435.1
MANALELPVPDTSSVGSEKATWVASPSYAFYHFGTSGAAVAAASTVTHPLDLLKVRLQMQMVGQRGPLIGMRQLGINLVKNEGLRALYMGLTPGLVRSLFYGGLRLGLYEPSLRLSEMAFGSPNILTKVVVGAFSGALATAVTNPVEVLKVRMQMGRLTTKGPLQELRKMAAEEGLTGFWKGAGPEMTRAAVFTASQLATYDETKRLVMRWTSLEDGFYLHFIASTIAGGASTIATAPIDVVKTRLMLQRESKTVGAYKN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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