Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000997`

染色体: Chr08 坐标: 7479301-7485639 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000997`
名称	SmilChr08G000997
描述	uncharacterized SmilChr08G000997
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	7479301 - 7485639 / `+`

ID 对照

NCBI Gene ID	`LOC131000515`
GeneID	`131000515`
locus_tag	`-`
NCBI Name	`LOC131000515`
原始查询	`SmilChr08G000997`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	ATP-dependent helicase family protein [Source:NCBI gene (formerly Entrezgene);Acc:837322]; symbol=MOM; hit=AT1G08060; species=arabidopsis; confidence=weak
产物	ATP-dependent helicase family protein [Source:NCBI gene (formerly Entrezgene);Acc:837322]; symbol=MOM; hit=AT1G08060; species=arabidopsis; confidence=weak
Arabidopsis	`AT1G08060` (MOM) ATP-dependent helicase family protein [Source:NCBI gene (formerly Entrezgene);Acc:837322] identity=27.1; qcov=0.161; evalue=7.13e-07; confidence=weak
Rice	`-` -
GO	GO:0031507 (heterochromatin formation)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131000515

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057782445.1`
2	Chromosome	染色体	0.00000	`XP_057782445.1`
3	Centromere	着丝粒	0.00000	`XP_057782445.1`
4	Chromatin	染色质	0.00000	`XP_057782445.1`
5	Telomere	端粒	0.00000	`XP_057782445.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:7480433`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C19,C77
`Chr8:7480517`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C19,C77
`Chr8:7480546`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A19,C12
`Chr8:7480734`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B68
`Chr8:7480770`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B104,B136,D4
`Chr8:7481159`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A11,A3,B22,C58
`Chr8:7481435`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A11,A3,B22,C58
`Chr8:7481499`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B140,C82
`Chr8:7481596`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B12,B23
`Chr8:7481648`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B108,C62
`Chr8:7481761`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B122,B139,C20,C61,D9
`Chr8:7481766`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B44,B78

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057926465.1
GTTTGGGCAGACTGCAGAATAGGAGTAGAGGAGAGCGAGGGATTCCTTACTCGACCAACAATTAAATATTAAGTGCTGGTTAATTGTCAAAGAAAGTAACTCTTCGGAATCATTCATTAGTTTTAGCTCTAGAATGCAGGAAAGTTAGCTACAGAAATACCAGAAAGACGATCCTTAGCCGTTGTGTATGTCGAAATCACAGAATCTTAAGCCTAGGATACCATCTTCAACTCCTGTCACTAATAGGAAGTCTGATAGTG...

XM_057926462.1
GACTGCAGGTGATCAGTTTCCCTCTAGCTCTCTCTCTCTCTCTCATTTTCCTTAGCTTTTTTTTTTTAATGCTTAATTTGTTGGAAACCTAATACATTATGAAGGGCTTTTTCCATGATCATTTCTTGGAAATTTCTACTTCTCTTTTCTGCAAGAATAGGAGTAGAGGAGAGCGAGGGATTCCTTACTCGACCAACAATTAAATATTAAGTGCTGGTTAATTGTCAAAGAAAGTAACTCTTCGGAATCATTCATTAGTT...

CDS

4 records

下载 CDS FASTA

LOC131000515
ATGTCGAAATCACAGAATCTTAAGCCTAGGATACCATCTTCAACTCCTGTCACTAATAGGAAGTCTGATAGTGTTCAGAAGAATAATGCACCAAGCATTCCTAGGAGGGGCACCAGCAGTAGGGGAATTTTTTCCTCAAGTTCTTCCGGTTCCAAGCAGTGTAGGGGACTCGATTCGTCCGAGTCGGATACAAATGAAGAGAGAATGAAGAAGAAGCATAAGTCTGTATTGCAGGTGACCATGGAAGCTGAAAAGTCTAA...

Protein

4 records

下载 Protein FASTA

XP_057782445.1
MSKSQNLKPRIPSSTPVTNRKSDSVQKNNAPSIPRRGTSSRGIFSSSSSGSKQCRGLDSSESDTNEERMKKKHKSVLQVTMEAEKSKVPIDSVVTEKKKLTGHSFKSQFKRVREEETVSGKETSNIDGGRAPNLKTVKSTIEESSGIKKHYEDQEHIALEDNSADIGKTVNEVEKKCDKRMKKLISEQERKIQEFHRIWEDNISKMERDHKLQVSFIRSIYGKSTKAIDKLKILDDNFAKEMAENKLHKDKQFEVLEAEQ...

XP_057782446.1
MSKSQNLKPRIPSSTPVTNRKSDSVQKNNAPSIPRRGTSSRGIFSSSSSGSKQCRGLDSSESDTNEERMKKKHKSVLQVTMEAEKSKVPIDSVVTEKKKLTGHSFKSQFKRVREEETVSGKETSNIDGGRAPNLKTVKSTIEESSGIKKHYEDQEHIALEDNSADIGKTVNEVEKKCDKRMKKLISEQERKIQEFHRIWEDNISKMERDHKLQVSFIRSIYGKSTKAIDKLKILDDNFAKEMAENKLHKDKQFEVLEAEQ...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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