当前解析结果
SmilChr08G001028| 统一新 Gene ID | SmilChr08G001028 |
|---|---|
| 名称 | SmilChr08G001028 |
| 描述 | uncharacterized SmilChr08G001028 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 7812416 - 7813377 / - |
| NCBI Gene ID | LOC131000608 |
|---|---|
| GeneID | 131000608 |
| locus_tag | - |
| NCBI Name | LOC131000608 |
| 原始查询 | SmilChr08G001028 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816100]; symbol=AT2G16030; hit=AT2G16030; species=arabidopsis; confidence=low |
| 产物 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816100]; symbol=AT2G16030; hit=AT2G16030; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G16030 (AT2G16030)S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816100] identity=32.7; qcov=1.06; evalue=1.96e-28; confidence=low |
| Rice | Os01g0785600- identity=29.8; qcov=1.04; evalue=1.22e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000608 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057782604.1 |
| 2 | Endoplasmic reticulum lumen | 内质网腔 | 0.20000 | XP_057782604.1 |
| 3 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057782604.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057782604.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057782604.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:7812593 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | A18,B12,B77,C35,C68,C77 |
Chr8:7812633 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr8:7812636 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B1,B11,B60,B76,C73 |
Chr8:7812640 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B48,B80 |
Chr8:7812643 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B11,B60 |
Chr8:7812655 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr8:7812658 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B30,B48,B8,D3 |
Chr8:7812686 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B41,B60,B76,C73 |
Chr8:7812687 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr8:7812690 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr8:7812711 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr8:7812734 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。