当前解析结果
SmilChr08G001306| 统一新 Gene ID | SmilChr08G001306 |
|---|---|
| 名称 | SmilChr08G001306 |
| 描述 | probable sugar phosphate/phosphate translocator At2g25520 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 10419978 - 10420385 / - |
| NCBI Gene ID | LOC130998051 |
|---|---|
| GeneID | 130998051 |
| locus_tag | - |
| NCBI Name | LOC130998051 |
| 原始查询 | SmilChr08G001306 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | probable sugar phosphate/phosphate translocator At2g25520 |
| 产物 | probable sugar phosphate/phosphate translocator At2g25520 |
| Arabidopsis | AT4G32390 (AT4G32390)Nucleotide-sugar transporter family protein [Source:NCBI gene (formerly Entrezgene);Acc:829374] identity=73.5; qcov=0.896; evalue=8.2e-54; confidence=high |
| Rice | Os01g0802850- identity=66.1; qcov=0.896; evalue=8.67e-45; confidence=medium |
| GO | GO:0005768 (endosome); GO:0005794 (Golgi apparatus); GO:0005802 (trans-Golgi network); GO:0015297 (antiporter activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998051 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057779469.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057779469.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057779469.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057779469.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057779469.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:10420010 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | B56,B96,C2 |
Chr8:10420010 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B56,B96,C2 |
Chr8:10420018 |
C |
T |
EMS_canonical_SNV | stop_gained | 151 | A1,A10,A13,A14,A16,A2,A21,A24,A3,A4,A5,A6,A7,A8,A9,B1,B100,B101,B103,B104,B105,B108,B11,B111,B112,B114,B115,B117,B12,B121,B123,B124,B125,B133,B135,B136,B137,B138,B139,B14,B15,B16,B17,B18,B19,B22,B23,B24,B25,B26,B28,B30,B31,B33,B34,B37,B38,B39,B4,B40,B41,B44,B47,B48,B52,B56,B6,B61,B62,B64,B65,B66,B68,B69,B7,B74,B77,B79,B8,B80,B81,B83,B85,B87,B89,B91,B95,B96,B97,B99,C1,C11,C12,C14,C16,C18,C19,C20,C22,C23,C25,C26,C27,C28,C29,C30,C33,C35,C36,C37,C38,C39,C4,C40,C41,C45,C46,C48,C49,C50,C51,C52,C54,C55,C56,C58,C59,C6,C60,C61,C62,C65,C69,C7,C72,C73,C74,C76,C78,C80,C83,C84,C85,C87,C9,D4,D5,D6,D7,D8,D9 |
Chr8:10420060 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A19,B105,B118,B18,B70 |
Chr8:10420097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B56,B96,C85 |
Chr8:10420170 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B56,C85 |
Chr8:10420186 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | B56,B96,C85 |
Chr8:10420186 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B56,B96,C85 |
Chr8:10420218 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B105,B118,B18,B70 |
Chr8:10420235 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B45,B62,C75 |
Chr8:10420251 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr8:10420260 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B56,B96,C85 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。