Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001537`

染色体: Chr08 坐标: 12509842-12514562 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001537`
名称	SmilChr08G001537
描述	ethylene receptor 2-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	12509842 - 12514562 / `+`

ID 对照

NCBI Gene ID	`LOC131001082`
GeneID	`131001082`
locus_tag	`-`
NCBI Name	`LOC131001082`
原始查询	`SmilChr08G001537`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ethylene receptor 2-like
产物	ethylene receptor 2-like
Arabidopsis	`AT3G04580` (EIN4) Signal transduction histidine kinase, hybrid-type, ethylene sensor [Source:NCBI gene (formerly Entrezgene);Acc:819614] identity=53.4; qcov=1.01; evalue=0; confidence=high
Rice	`Os04g0169100` (ETR2) - identity=50.6; qcov=0.998; evalue=0; confidence=high
GO	GO:0000155 (phosphorelay sensor kinase activity); GO:0000160 (phosphorelay signal transduction system); GO:0005515 (protein binding); GO:0005783 (endoplasmic reticulum); GO:0005789 (endoplasmic reticulum membrane); GO:0009723 (response to ethylene); GO:0038199 (ethylene receptor activity); GO:0051740 (ethylene binding)
KEGG	smil04016 (MAPK signaling pathway - plant - Salvia miltiorrhiza (redroot sage)); smil04075 (Plant hormone signal transduction - Salvia miltiorrhiza (redroot sage))
Pfam	PF00072 (Response_reg); PF00512 (HisKA); PF01590 (GAF); PF25487 (ETR1_N)
InterPro	-
eggNOG	-
NR	GeneID:131001082

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057783265.1`
2	Endoplasmic reticulum	内质网	0.80000	`XP_057783258.1`
3	Endoplasmic reticulum membrane	内质网膜	0.40000	`XP_057783258.1`
4	Cytoplasm	细胞质	0.40000	`XP_057783265.1`
5	Cell membrane	细胞膜	0.20000	`XP_057783258.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:12511281`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B104,B108,B98,C45,C9
`Chr8:12511819`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B114,C37
`Chr8:12511877`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B112
`Chr8:12511919`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B128,C17,C87
`Chr8:12512119`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B73
`Chr8:12512786`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr8:12513228`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C80
`Chr8:12513500`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B2
`Chr8:12513523`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B117,B126,B64,C41

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783258.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783259.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783260.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783261.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783262.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783263.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783264.1

763 aa

382

763

ETR1_N

GAF

HisKA

Response_reg

PF25487 ETR1_N 41-138 aa PF01590 GAF 181-331 aa PF00512 HisKA 368-432 aa PF00072 Response_reg 638-751 aa

XP_057783265.1

620 aa

310

620

GAF

HisKA

Response_reg

PF01590 GAF 38-188 aa PF00512 HisKA 225-289 aa PF00072 Response_reg 495-608 aa

XP_057783266.1

620 aa

310

620

GAF

HisKA

Response_reg

PF01590 GAF 38-188 aa PF00512 HisKA 225-289 aa PF00072 Response_reg 495-608 aa

XP_057783267.1

620 aa

310

620

GAF

HisKA

Response_reg

PF01590 GAF 38-188 aa PF00512 HisKA 225-289 aa PF00072 Response_reg 495-608 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783258.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783258.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783258.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783258.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783259.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783259.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783259.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783259.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783260.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783260.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783260.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783260.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783261.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783261.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783261.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783261.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783262.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783262.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783262.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783262.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783263.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783263.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783263.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783263.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783264.1`	Pfam	`PF25487`	ETR1_N	Domain	41	138	1.1e-41	142.2	Ethylene receptor 1-like, N-terminal domain
`XP_057783264.1`	Pfam	`PF01590`	GAF	Domain	181	331	4.3e-12	47.4	GAF domain
`XP_057783264.1`	Pfam	`PF00512`	HisKA	Domain	368	432	3.2e-09	37.4	His Kinase A (phospho-acceptor) domain
`XP_057783264.1`	Pfam	`PF00072`	Response_reg	Domain	638	751	7.1e-20	72.0	Response regulator receiver domain
`XP_057783265.1`	Pfam	`PF01590`	GAF	Domain	38	188	2.2e-12	48.4	GAF domain
`XP_057783265.1`	Pfam	`PF00512`	HisKA	Domain	225	289	2.4e-09	37.8	His Kinase A (phospho-acceptor) domain
`XP_057783265.1`	Pfam	`PF00072`	Response_reg	Domain	495	608	5.1e-20	72.4	Response regulator receiver domain
`XP_057783266.1`	Pfam	`PF01590`	GAF	Domain	38	188	2.2e-12	48.4	GAF domain
`XP_057783266.1`	Pfam	`PF00512`	HisKA	Domain	225	289	2.4e-09	37.8	His Kinase A (phospho-acceptor) domain
`XP_057783266.1`	Pfam	`PF00072`	Response_reg	Domain	495	608	5.1e-20	72.4	Response regulator receiver domain
`XP_057783267.1`	Pfam	`PF01590`	GAF	Domain	38	188	2.2e-12	48.4	GAF domain
`XP_057783267.1`	Pfam	`PF00512`	HisKA	Domain	225	289	2.4e-09	37.8	His Kinase A (phospho-acceptor) domain
`XP_057783267.1`	Pfam	`PF00072`	Response_reg	Domain	495	608	5.1e-20	72.4	Response regulator receiver domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

13 records

下载 cDNA FASTA

XR_009093857.1
AGTTCGCTTCATGTAACCCCCGCAGGACCCACCTACGCCCTCAGATTTCCCCTCTCTCTCCCCTCCTCTCTCTACACTTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATTTTTTCACCTGCTTTTTGTATCAGTAGCGCCTAGCGGAACAGCGGCGCTCGCGAATCTCTCCCTAAATTTTCTCTCAGTAAAAACATCCGTGAGTCGCGGACTCGTGTCTGAACACTCGCGCGCTCCGCTCTCTCT...

XR_009093855.1
AGTTCGCTTCATGTAACCCCCGCAGGACCCACCTACGCCCTCAGATTTCCCCTCTCTCTCCCCTCCTCTCTCTACACTTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATTTTTTCACCTGCTTTTTGTATCAGTAGCGCCTAGCGGAACAGCGGCGCTCGCGAATCTCTCCCTAAATTTTCTCTCAGTAAAAACATCCGTGAGTCGCGGACTCGTGTCTGAACACTCGCGCGCTCCGCTCTCTCT...

CDS

10 records

下载 CDS FASTA

LOC131001082
ATGTCGAAGGCATTAGCATCGTTTCTGTTAATTCTGTCGTTGTTTCTTTCCATATCGGCTGCTGATAATGGGTTTCCTCGTTGTAATTGTGATGAGGAGGGATTTTGGAGCACTGAATCTATCATGGAGTGCCAAAGAGTTAGTGATTTTTTGATTGCAGTAGCCTACTTCTCCATCCCTATTGAGCTGCTTTACTTTGTTAGCTGTTCCAATATACCATTTAAATGGGTTCTTTTTCAGTTCATTTCGTTCATTGTCCT...

Protein

10 records

下载 Protein FASTA

XP_057783258.1
MSKALASFLLILSLFLSISAADNGFPRCNCDEEGFWSTESIMECQRVSDFLIAVAYFSIPIELLYFVSCSNIPFKWVLFQFISFIVLCGMTHLLNGWTYGPHTFQLMLALTIFKFLTALVSFATAITLITLIPLLLKVKVREIMLRKKTWDLDREVGIIKKQEEAGWHVRMLTQEIRKSLDRHTILDTTLVELSKALDLQNCAIWMPNTGKTEMILTHELKGRNFANNFISPIPTSDPDVREVKGSDGVKILDPESALAL...

XP_057783259.1
MSKALASFLLILSLFLSISAADNGFPRCNCDEEGFWSTESIMECQRVSDFLIAVAYFSIPIELLYFVSCSNIPFKWVLFQFISFIVLCGMTHLLNGWTYGPHTFQLMLALTIFKFLTALVSFATAITLITLIPLLLKVKVREIMLRKKTWDLDREVGIIKKQEEAGWHVRMLTQEIRKSLDRHTILDTTLVELSKALDLQNCAIWMPNTGKTEMILTHELKGRNFANNFISPIPTSDPDVREVKGSDGVKILDPESALAL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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