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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr08G001562

染色体: Chr08 坐标: 12858834-12863402 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr08G001562
名称SmilChr08G001562
描述pentatricopeptide repeat-containing protein At3g23020
染色体 / SeqIDChr08 / NC_080394.1
坐标与链方向12858834 - 12863402 / +

ID 对照

NCBI Gene IDLOC131001105
GeneID131001105
locus_tag-
NCBI NameLOC131001105
原始查询SmilChr08G001562

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At3g23020
产物pentatricopeptide repeat-containing protein At3g23020
ArabidopsisAT3G23020 (AT3G23020)
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821876]
identity=55.1; qcov=0.989; evalue=0; confidence=high
RiceOs03g0162900
-
identity=51.6; qcov=0.801; evalue=0; confidence=high
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131001105

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Chloroplast 叶绿体 1.00000 XP_057783307.1
2 Mitochondrion 线粒体 0.20000 XP_057783307.1
3 Chloroplast stroma 叶绿体基质 0.20000 XP_057783307.1
4 Nucleus 细胞核 0.00000 XP_057783307.1
5 Chromosome 染色体 0.00000 XP_057783307.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr8:12859016 C T EMS_canonical_SNV CDS_variant 4 A16,A22,C47,D7
Chr8:12859058 C T EMS_canonical_SNV CDS_variant 1 B6
Chr8:12859126 G A EMS_canonical_SNV CDS_variant 5 B32,B47,B72,C17,C62
Chr8:12859137 G A EMS_canonical_SNV CDS_variant 1 C9
Chr8:12859451 G A EMS_canonical_SNV CDS_variant 5 B105,B34,B59,B68,D6
Chr8:12859475 G A EMS_canonical_SNV CDS_variant 5 A16,A22,C25,C47,D7
Chr8:12859484 G A EMS_canonical_SNV CDS_variant 5 A16,A22,C25,C47,D7
Chr8:12859632 C T EMS_canonical_SNV CDS_variant 3 B104,B108,D3
Chr8:12860035 C T EMS_canonical_SNV CDS_variant 1 B6
Chr8:12860172 C T EMS_canonical_SNV CDS_variant 1 C9
Chr8:12860444 G A EMS_canonical_SNV CDS_variant 4 B136,B45,B62,B77
Chr8:12860452 C T EMS_canonical_SNV CDS_variant 2 B108,D3

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783307.1
903 aa
N
1
452
903
PPR_2
PPR
PPR
TPR_24
PPR_long
PPR_2
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR
TPR_24
PPR
PPR_long
PPR
PPR_3
PPR
PPR_2
TPR_24
PPR
PPR
PPR
PPR
PPR_3
PPR
C
PF13041 PPR_2 234-281 aa PF01535 PPR 237-266 aa PF01535 PPR 271-299 aa PF23276 TPR_24 349-451 aa PF17177 PPR_long 350-469 aa PF13041 PPR_2 356-399 aa PF12854 PPR_1 357-383 aa PF01535 PPR 357-387 aa PF13812 PPR_3 357-404 aa PF12854 PPR_1 385-417 aa PF13041 PPR_2 389-436 aa PF01535 PPR 392-422 aa PF12854 PPR_1 422-453 aa PF13041 PPR_2 424-472 aa PF01535 PPR 428-454 aa PF01535 PPR 462-492 aa PF23276 TPR_24 541-660 aa PF01535 PPR 567-595 aa PF17177 PPR_long 582-734 aa PF01535 PPR 602-630 aa PF13812 PPR_3 622-680 aa PF01535 PPR 636-665 aa PF13041 PPR_2 637-680 aa PF23276 TPR_24 668-764 aa PF01535 PPR 671-699 aa PF01535 PPR 705-730 aa PF01535 PPR 741-769 aa PF01535 PPR 778-804 aa PF13812 PPR_3 795-848 aa PF01535 PPR 810-838 aa
XP_057783308.1
903 aa
N
1
452
903
PPR_2
PPR
PPR
TPR_24
PPR_long
PPR_2
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR
TPR_24
PPR
PPR_long
PPR
PPR_3
PPR
PPR_2
TPR_24
PPR
PPR
PPR
PPR
PPR_3
PPR
C
PF13041 PPR_2 234-281 aa PF01535 PPR 237-266 aa PF01535 PPR 271-299 aa PF23276 TPR_24 349-451 aa PF17177 PPR_long 350-469 aa PF13041 PPR_2 356-399 aa PF12854 PPR_1 357-383 aa PF01535 PPR 357-387 aa PF13812 PPR_3 357-404 aa PF12854 PPR_1 385-417 aa PF13041 PPR_2 389-436 aa PF01535 PPR 392-422 aa PF12854 PPR_1 422-453 aa PF13041 PPR_2 424-472 aa PF01535 PPR 428-454 aa PF01535 PPR 462-492 aa PF23276 TPR_24 541-660 aa PF01535 PPR 567-595 aa PF17177 PPR_long 582-734 aa PF01535 PPR 602-630 aa PF13812 PPR_3 622-680 aa PF01535 PPR 636-665 aa PF13041 PPR_2 637-680 aa PF23276 TPR_24 668-764 aa PF01535 PPR 671-699 aa PF01535 PPR 705-730 aa PF01535 PPR 741-769 aa PF01535 PPR 778-804 aa PF13812 PPR_3 795-848 aa PF01535 PPR 810-838 aa
XP_057783309.1
903 aa
N
1
452
903
PPR_2
PPR
PPR
TPR_24
PPR_long
PPR_2
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR
TPR_24
PPR
PPR_long
PPR
PPR_3
PPR
PPR_2
TPR_24
PPR
PPR
PPR
PPR
PPR_3
PPR
C
PF13041 PPR_2 234-281 aa PF01535 PPR 237-266 aa PF01535 PPR 271-299 aa PF23276 TPR_24 349-451 aa PF17177 PPR_long 350-469 aa PF13041 PPR_2 356-399 aa PF12854 PPR_1 357-383 aa PF01535 PPR 357-387 aa PF13812 PPR_3 357-404 aa PF12854 PPR_1 385-417 aa PF13041 PPR_2 389-436 aa PF01535 PPR 392-422 aa PF12854 PPR_1 422-453 aa PF13041 PPR_2 424-472 aa PF01535 PPR 428-454 aa PF01535 PPR 462-492 aa PF23276 TPR_24 541-660 aa PF01535 PPR 567-595 aa PF17177 PPR_long 582-734 aa PF01535 PPR 602-630 aa PF13812 PPR_3 622-680 aa PF01535 PPR 636-665 aa PF13041 PPR_2 637-680 aa PF23276 TPR_24 668-764 aa PF01535 PPR 671-699 aa PF01535 PPR 705-730 aa PF01535 PPR 741-769 aa PF01535 PPR 778-804 aa PF13812 PPR_3 795-848 aa PF01535 PPR 810-838 aa
XP_057783311.1
903 aa
N
1
452
903
PPR_2
PPR
PPR
TPR_24
PPR_long
PPR_2
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR
TPR_24
PPR
PPR_long
PPR
PPR_3
PPR
PPR_2
TPR_24
PPR
PPR
PPR
PPR
PPR_3
PPR
C
PF13041 PPR_2 234-281 aa PF01535 PPR 237-266 aa PF01535 PPR 271-299 aa PF23276 TPR_24 349-451 aa PF17177 PPR_long 350-469 aa PF13041 PPR_2 356-399 aa PF12854 PPR_1 357-383 aa PF01535 PPR 357-387 aa PF13812 PPR_3 357-404 aa PF12854 PPR_1 385-417 aa PF13041 PPR_2 389-436 aa PF01535 PPR 392-422 aa PF12854 PPR_1 422-453 aa PF13041 PPR_2 424-472 aa PF01535 PPR 428-454 aa PF01535 PPR 462-492 aa PF23276 TPR_24 541-660 aa PF01535 PPR 567-595 aa PF17177 PPR_long 582-734 aa PF01535 PPR 602-630 aa PF13812 PPR_3 622-680 aa PF01535 PPR 636-665 aa PF13041 PPR_2 637-680 aa PF23276 TPR_24 668-764 aa PF01535 PPR 671-699 aa PF01535 PPR 705-730 aa PF01535 PPR 741-769 aa PF01535 PPR 778-804 aa PF13812 PPR_3 795-848 aa PF01535 PPR 810-838 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057783307.1 Pfam PF13041 PPR_2 Repeat 234 281 9.6e-95 311.3 PPR repeat family
XP_057783307.1 Pfam PF01535 PPR Repeat 237 266 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF01535 PPR Repeat 271 299 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF23276 TPR_24 Repeat 349 451 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783307.1 Pfam PF17177 PPR_long Repeat 350 469 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783307.1 Pfam PF13041 PPR_2 Repeat 356 399 9.6e-95 311.3 PPR repeat family
XP_057783307.1 Pfam PF12854 PPR_1 Repeat 357 383 1.5e-67 223.7 PPR repeat
XP_057783307.1 Pfam PF01535 PPR Repeat 357 387 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF13812 PPR_3 Repeat 357 404 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783307.1 Pfam PF12854 PPR_1 Repeat 385 417 1.5e-67 223.7 PPR repeat
XP_057783307.1 Pfam PF13041 PPR_2 Repeat 389 436 9.6e-95 311.3 PPR repeat family
XP_057783307.1 Pfam PF01535 PPR Repeat 392 422 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF12854 PPR_1 Repeat 422 453 1.5e-67 223.7 PPR repeat
XP_057783307.1 Pfam PF13041 PPR_2 Repeat 424 472 9.6e-95 311.3 PPR repeat family
XP_057783307.1 Pfam PF01535 PPR Repeat 428 454 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF01535 PPR Repeat 462 492 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF23276 TPR_24 Repeat 541 660 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783307.1 Pfam PF01535 PPR Repeat 567 595 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF17177 PPR_long Repeat 582 734 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783307.1 Pfam PF01535 PPR Repeat 602 630 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF13812 PPR_3 Repeat 622 680 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783307.1 Pfam PF01535 PPR Repeat 636 665 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF13041 PPR_2 Repeat 637 680 9.6e-95 311.3 PPR repeat family
XP_057783307.1 Pfam PF23276 TPR_24 Repeat 668 764 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783307.1 Pfam PF01535 PPR Repeat 671 699 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF01535 PPR Repeat 705 730 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF01535 PPR Repeat 741 769 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF01535 PPR Repeat 778 804 7.5e-87 280.4 PPR repeat
XP_057783307.1 Pfam PF13812 PPR_3 Repeat 795 848 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783307.1 Pfam PF01535 PPR Repeat 810 838 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF13041 PPR_2 Repeat 234 281 9.6e-95 311.3 PPR repeat family
XP_057783308.1 Pfam PF01535 PPR Repeat 237 266 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF01535 PPR Repeat 271 299 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF23276 TPR_24 Repeat 349 451 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783308.1 Pfam PF17177 PPR_long Repeat 350 469 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783308.1 Pfam PF13041 PPR_2 Repeat 356 399 9.6e-95 311.3 PPR repeat family
XP_057783308.1 Pfam PF12854 PPR_1 Repeat 357 383 1.5e-67 223.7 PPR repeat
XP_057783308.1 Pfam PF01535 PPR Repeat 357 387 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF13812 PPR_3 Repeat 357 404 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783308.1 Pfam PF12854 PPR_1 Repeat 385 417 1.5e-67 223.7 PPR repeat
XP_057783308.1 Pfam PF13041 PPR_2 Repeat 389 436 9.6e-95 311.3 PPR repeat family
XP_057783308.1 Pfam PF01535 PPR Repeat 392 422 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF12854 PPR_1 Repeat 422 453 1.5e-67 223.7 PPR repeat
XP_057783308.1 Pfam PF13041 PPR_2 Repeat 424 472 9.6e-95 311.3 PPR repeat family
XP_057783308.1 Pfam PF01535 PPR Repeat 428 454 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF01535 PPR Repeat 462 492 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF23276 TPR_24 Repeat 541 660 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783308.1 Pfam PF01535 PPR Repeat 567 595 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF17177 PPR_long Repeat 582 734 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783308.1 Pfam PF01535 PPR Repeat 602 630 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF13812 PPR_3 Repeat 622 680 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783308.1 Pfam PF01535 PPR Repeat 636 665 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF13041 PPR_2 Repeat 637 680 9.6e-95 311.3 PPR repeat family
XP_057783308.1 Pfam PF23276 TPR_24 Repeat 668 764 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783308.1 Pfam PF01535 PPR Repeat 671 699 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF01535 PPR Repeat 705 730 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF01535 PPR Repeat 741 769 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF01535 PPR Repeat 778 804 7.5e-87 280.4 PPR repeat
XP_057783308.1 Pfam PF13812 PPR_3 Repeat 795 848 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783308.1 Pfam PF01535 PPR Repeat 810 838 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF13041 PPR_2 Repeat 234 281 9.6e-95 311.3 PPR repeat family
XP_057783309.1 Pfam PF01535 PPR Repeat 237 266 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF01535 PPR Repeat 271 299 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF23276 TPR_24 Repeat 349 451 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783309.1 Pfam PF17177 PPR_long Repeat 350 469 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783309.1 Pfam PF13041 PPR_2 Repeat 356 399 9.6e-95 311.3 PPR repeat family
XP_057783309.1 Pfam PF12854 PPR_1 Repeat 357 383 1.5e-67 223.7 PPR repeat
XP_057783309.1 Pfam PF01535 PPR Repeat 357 387 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF13812 PPR_3 Repeat 357 404 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783309.1 Pfam PF12854 PPR_1 Repeat 385 417 1.5e-67 223.7 PPR repeat
XP_057783309.1 Pfam PF13041 PPR_2 Repeat 389 436 9.6e-95 311.3 PPR repeat family
XP_057783309.1 Pfam PF01535 PPR Repeat 392 422 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF12854 PPR_1 Repeat 422 453 1.5e-67 223.7 PPR repeat
XP_057783309.1 Pfam PF13041 PPR_2 Repeat 424 472 9.6e-95 311.3 PPR repeat family
XP_057783309.1 Pfam PF01535 PPR Repeat 428 454 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF01535 PPR Repeat 462 492 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF23276 TPR_24 Repeat 541 660 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783309.1 Pfam PF01535 PPR Repeat 567 595 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF17177 PPR_long Repeat 582 734 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783309.1 Pfam PF01535 PPR Repeat 602 630 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF13812 PPR_3 Repeat 622 680 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783309.1 Pfam PF01535 PPR Repeat 636 665 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF13041 PPR_2 Repeat 637 680 9.6e-95 311.3 PPR repeat family
XP_057783309.1 Pfam PF23276 TPR_24 Repeat 668 764 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783309.1 Pfam PF01535 PPR Repeat 671 699 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF01535 PPR Repeat 705 730 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF01535 PPR Repeat 741 769 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF01535 PPR Repeat 778 804 7.5e-87 280.4 PPR repeat
XP_057783309.1 Pfam PF13812 PPR_3 Repeat 795 848 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783309.1 Pfam PF01535 PPR Repeat 810 838 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF13041 PPR_2 Repeat 234 281 9.6e-95 311.3 PPR repeat family
XP_057783311.1 Pfam PF01535 PPR Repeat 237 266 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF01535 PPR Repeat 271 299 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF23276 TPR_24 Repeat 349 451 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783311.1 Pfam PF17177 PPR_long Repeat 350 469 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783311.1 Pfam PF13041 PPR_2 Repeat 356 399 9.6e-95 311.3 PPR repeat family
XP_057783311.1 Pfam PF12854 PPR_1 Repeat 357 383 1.5e-67 223.7 PPR repeat
XP_057783311.1 Pfam PF01535 PPR Repeat 357 387 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF13812 PPR_3 Repeat 357 404 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783311.1 Pfam PF12854 PPR_1 Repeat 385 417 1.5e-67 223.7 PPR repeat
XP_057783311.1 Pfam PF13041 PPR_2 Repeat 389 436 9.6e-95 311.3 PPR repeat family
XP_057783311.1 Pfam PF01535 PPR Repeat 392 422 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF12854 PPR_1 Repeat 422 453 1.5e-67 223.7 PPR repeat
XP_057783311.1 Pfam PF13041 PPR_2 Repeat 424 472 9.6e-95 311.3 PPR repeat family
XP_057783311.1 Pfam PF01535 PPR Repeat 428 454 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF01535 PPR Repeat 462 492 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF23276 TPR_24 Repeat 541 660 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783311.1 Pfam PF01535 PPR Repeat 567 595 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF17177 PPR_long Repeat 582 734 1.6e-36 126.4 Pentacotripeptide-repeat region of PRORP
XP_057783311.1 Pfam PF01535 PPR Repeat 602 630 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF13812 PPR_3 Repeat 622 680 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783311.1 Pfam PF01535 PPR Repeat 636 665 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF13041 PPR_2 Repeat 637 680 9.6e-95 311.3 PPR repeat family
XP_057783311.1 Pfam PF23276 TPR_24 Repeat 668 764 7.2e-39 133.4 Pentatricopeptide repeat-containing protein
XP_057783311.1 Pfam PF01535 PPR Repeat 671 699 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF01535 PPR Repeat 705 730 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF01535 PPR Repeat 741 769 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF01535 PPR Repeat 778 804 7.5e-87 280.4 PPR repeat
XP_057783311.1 Pfam PF13812 PPR_3 Repeat 795 848 1.9e-48 163.1 Pentatricopeptide repeat domain
XP_057783311.1 Pfam PF01535 PPR Repeat 810 838 7.5e-87 280.4 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA
XM_057927324.1
CTCGTTTTCATTTGTTTGTAAAATACTGTCTATCAAGAATCTCTGGTGTTTAACCTTAATCCCGGCAAAATGTTTGTACAGTTTTCGCATTCAGACACCAGCTGTCTACGCATATTCAGTTCCACAACCACGCCGCCAAACGTCGGAATTTCTGTCACTCCACCACCCCAGAAATCCAGCGACACAGTAAAAAAGAAGCTGAAGCGGCAAGTTCTCGAGTGCCCCGGCTTGTTAAGAAAAAATAGATTTGTCAAAGGTCC...
XM_057927326.1
CTCGTTTTCATTTGTTTGTAAAATACTGTCTATCAAGAATCTCTGGTGTTTAACCTTAATCCCGGCAAAATGTTTGTACAGTTTTCGCATTCAGACACCAGCTGTCTACGCATATTCAGTTCCACAACCACGCCGCCAAACGTCGGAATTTCTGTCACTCCACCACCCCAGAAATCCAGCGACACAGTAAAAAAGAAGCTGAAGCGGCAAGTTCTCGAGTGCCCCGGCTTGTTAAGAAAAAATAGATTTGTCAAAGGTCC...

CDS

4 records

下载 CDS FASTA
LOC131001105
ATGTTTGTACAGTTTTCGCATTCAGACACCAGCTGTCTACGCATATTCAGTTCCACAACCACGCCGCCAAACGTCGGAATTTCTGTCACTCCACCACCCCAGAAATCCAGCGACACAGTAAAAAAGAAGCTGAAGCGGCAAGTTCTCGAGTGCCCCGGCTTGTTAAGAAAAAATAGATTTGTCAAAGGTCCTCGTGGCAGAATCGAGAGAAACCTCGATTTCGGGGGTTGTTCTGGAACTCAAGGTGGCCTCTTTTATGA...
LOC131001105
ATGTTTGTACAGTTTTCGCATTCAGACACCAGCTGTCTACGCATATTCAGTTCCACAACCACGCCGCCAAACGTCGGAATTTCTGTCACTCCACCACCCCAGAAATCCAGCGACACAGTAAAAAAGAAGCTGAAGCGGCAAGTTCTCGAGTGCCCCGGCTTGTTAAGAAAAAATAGATTTGTCAAAGGTCCTCGTGGCAGAATCGAGAGAAACCTCGATTTCGGGGGTTGTTCTGGAACTCAAGGTGGCCTCTTTTATGA...

Protein

4 records

下载 Protein FASTA
XP_057783307.1
MFVQFSHSDTSCLRIFSSTTTPPNVGISVTPPPQKSSDTVKKKLKRQVLECPGLLRKNRFVKGPRGRIERNLDFGGCSGTQGGLFYDRNVVPEKEEEILENSDSKVGKNGSFDVLSVPENRVNEELLARNSLAEDAKNRVYRKVKGNYSKNGQGIRRDEGMQTKCSTKWGRYGGSIPAMLEALERISDLDEALKPWETTLTNKERSILLKEQLGWERAMEIFEWFKRKGCHEVNVIHYNIMLRLLGKARQWSEIERLWDE...
XP_057783308.1
MFVQFSHSDTSCLRIFSSTTTPPNVGISVTPPPQKSSDTVKKKLKRQVLECPGLLRKNRFVKGPRGRIERNLDFGGCSGTQGGLFYDRNVVPEKEEEILENSDSKVGKNGSFDVLSVPENRVNEELLARNSLAEDAKNRVYRKVKGNYSKNGQGIRRDEGMQTKCSTKWGRYGGSIPAMLEALERISDLDEALKPWETTLTNKERSILLKEQLGWERAMEIFEWFKRKGCHEVNVIHYNIMLRLLGKARQWSEIERLWDE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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跳转到基因组浏览器