Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001836`

染色体: Chr08 坐标: 15739813-15743159 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001836`
名称	SmilChr08G001836
描述	transcription factor TGA1-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	15739813 - 15743159 / `-`

ID 对照

NCBI Gene ID	`LOC131001379`
GeneID	`131001379`
locus_tag	`-`
NCBI Name	`LOC131001379`
原始查询	`SmilChr08G001836`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	transcription factor TGA1-like
产物	transcription factor TGA1-like
Arabidopsis	`AT5G65210` (TGA1) bZIP transcription factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:836646] identity=64.8; qcov=1.01; evalue=3.29e-175; confidence=high
Rice	`Os04g0637000` (OsTGAP1) - identity=51.2; qcov=1.01; evalue=7.95e-123; confidence=high
GO	GO:0003700 (DNA-binding transcription factor activity); GO:0006351 (DNA-templated transcription); GO:0006355 (regulation of DNA-templated transcription); GO:0043565 (sequence-specific DNA binding)
KEGG	smil04075 (Plant hormone signal transduction - Salvia miltiorrhiza (redroot sage))
Pfam	PF00170 (bZIP_1); PF07716 (bZIP_2); PF14144 (DOG1)
InterPro	-
eggNOG	-
NR	GeneID:131001379

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057783729.1`
2	Cytoplasm	细胞质	0.80000	`XP_057783731.1`
3	Cytosol	细胞质基质	0.20000	`XP_057783729.1`
4	Chromosome	染色体	0.00000	`XP_057783729.1`
5	Centromere	着丝粒	0.00000	`XP_057783729.1`

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783729.1

371 aa

186

371

bZIP_2

bZIP_1

DOG1

PF07716 bZIP_2 75-125 aa PF00170 bZIP_1 78-107 aa PF14144 DOG1 166-239 aa

XP_057783730.1

370 aa

185

370

bZIP_2

bZIP_1

DOG1

PF07716 bZIP_2 75-124 aa PF00170 bZIP_1 78-107 aa PF14144 DOG1 165-238 aa

XP_057783731.1

365 aa

182

365

bZIP_2

bZIP_1

DOG1

PF07716 bZIP_2 75-125 aa PF00170 bZIP_1 78-107 aa PF14144 DOG1 166-241 aa

XP_057783732.1

364 aa

182

364

bZIP_2

bZIP_1

DOG1

PF07716 bZIP_2 75-125 aa PF00170 bZIP_1 78-107 aa PF14144 DOG1 166-241 aa

XP_057783734.1

364 aa

182

364

bZIP_2

bZIP_1

DOG1

PF07716 bZIP_2 75-124 aa PF00170 bZIP_1 78-107 aa PF14144 DOG1 165-240 aa

XP_057783735.1

363 aa

182

363

bZIP_2

bZIP_1

DOG1

PF07716 bZIP_2 75-124 aa PF00170 bZIP_1 78-107 aa PF14144 DOG1 165-240 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783729.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	75	125	1.5e-05	25.6	Basic region leucine zipper
`XP_057783729.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	78	107	3.4e-08	34.2	bZIP transcription factor
`XP_057783729.1`	Pfam	`PF14144`	DOG1	Family	166	239	5.8e-28	97.6	Seed dormancy control
`XP_057783730.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	75	124	1.3e-05	25.8	Basic region leucine zipper
`XP_057783730.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	78	107	2.5e-08	34.6	bZIP transcription factor
`XP_057783730.1`	Pfam	`PF14144`	DOG1	Family	165	238	5.8e-28	97.6	Seed dormancy control
`XP_057783731.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	75	125	1.5e-05	25.7	Basic region leucine zipper
`XP_057783731.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	78	107	3.4e-08	34.2	bZIP transcription factor
`XP_057783731.1`	Pfam	`PF14144`	DOG1	Family	166	241	2e-28	99.1	Seed dormancy control
`XP_057783732.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	75	125	1.5e-05	25.7	Basic region leucine zipper
`XP_057783732.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	78	107	3.3e-08	34.2	bZIP transcription factor
`XP_057783732.1`	Pfam	`PF14144`	DOG1	Family	166	241	8.2e-29	100.3	Seed dormancy control
`XP_057783734.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	75	124	1.3e-05	25.9	Basic region leucine zipper
`XP_057783734.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	78	107	2.6e-08	34.6	bZIP transcription factor
`XP_057783734.1`	Pfam	`PF14144`	DOG1	Family	165	240	2e-28	99.1	Seed dormancy control
`XP_057783735.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	75	124	1.3e-05	25.9	Basic region leucine zipper
`XP_057783735.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	78	107	2.5e-08	34.6	bZIP transcription factor
`XP_057783735.1`	Pfam	`PF14144`	DOG1	Family	165	240	8.8e-29	100.2	Seed dormancy control

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057927751.1
GTGTCTCAAAAAAATTTAAATAATTAGTTATAATTAAATAGTGTTGATAGCAGGAAGTTGATGTGTGATGAGATGGAGGGGTTAATGATTGATTGATGAGGTCAAGGGGCAAGTAAGCAAAATGGTAGTGAGACTGACCTGGTGCGCATATTCAACGCAAAACATAACCACTGTTGCTTTGCTTACTTTAATTTAATGGAAATCTCACCATTTTTTTTCTCCTTAACTGTCCCAACACTGTAGCTTACGATAACAACACA...

XM_057927748.1
GTGTCTCAAAAAAATTTAAATAATTAGTTATAATTAAATAGTGTTGATAGCAGGAAGTTGATGTGTGATGAGATGGAGGGGTTAATGATTGATTGATGAGGTCAAGGGGCAAGTAAGCAAAATGGTAGTGAGACTGACCTGGTGCGCATATTCAACGCAAAACATAACCACTGTTGCTTTGCTTACTTTAATTTAATGGAAATCTCACCATTTTTTTTCTCCTTAACTGTCCCAACACTGTAGCTTACGATAACAACACA...

CDS

6 records

下载 CDS FASTA

LOC131001379
ATGAATTCCACGACCACACAGTTCGTTCCCTCACGAAGGATGGGCTTATACGAACCGGTCCATCAGATGAGCATGTGGGGAGACTTTAGAAACACCTTGCTCGACTCATCCCCGCCTCCAGAGCTGATGCTGGAGGTCAATGCCAATCTAGACAACCAGTCAGAGGATACTACTTCACAAGGAACTTTTGCAGCTTCGCATAGAAATGATCAAGAAGCAAGCAAACCCGATGATAAGGTTCTGAGACGCCTAGCACAGAA...

Protein

6 records

下载 Protein FASTA

XP_057783729.1
MNSTTTQFVPSRRMGLYEPVHQMSMWGDFRNTLLDSSPPPELMLEVNANLDNQSEDTTSQGTFAASHRNDQEASKPDDKVLRRLAQNREAARKSRLRKKAYVQQLENSKLRLIQLEQELNRVRQQQGLCVGGGIDTSQLAYTGNSNPGISAFELEYGHWVEEQNRQISDLKNALHSDMGDTELQIFVDGGMQHYFELFSMKVMAARADVFYIMSGMWKTSAERFFLWIGGFRPSELVKVKIKTCQVLSPHLDALSEQQRL...

XP_057783730.1
MNSTTTQFVPSRRMGLYEPVHQMSMWGDFRNTLLDSSPPPELMLEVNANLDNQSEDTTSQGTFAASHRNDQEASKPDDKVLRRLAQNREAARKSRLRKKAYVQQLENSKLRLIQLEQELNRVRQQGLCVGGGIDTSQLAYTGNSNPGISAFELEYGHWVEEQNRQISDLKNALHSDMGDTELQIFVDGGMQHYFELFSMKVMAARADVFYIMSGMWKTSAERFFLWIGGFRPSELVKVKIKTCQVLSPHLDALSEQQRLD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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