Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001848`

染色体: Chr08 坐标: 15840557-15845438 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001848`
名称	SmilChr08G001848
描述	MICOS complex subunit MIC60, mitochondrial-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	15840557 - 15845438 / `+`

ID 对照

NCBI Gene ID	`LOC131001390`
GeneID	`131001390`
locus_tag	`-`
NCBI Name	`LOC131001390`
原始查询	`SmilChr08G001848`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	MICOS complex subunit MIC60, mitochondrial-like
产物	MICOS complex subunit MIC60%2C mitochondrial-like
Arabidopsis	`AT4G39690` (AT4G39690) MICOS complex subunit [Source:NCBI gene (formerly Entrezgene);Acc:830124] identity=45.2; qcov=1.06; evalue=2.95e-153; confidence=high
Rice	`Os04g0636600` - identity=48.5; qcov=0.16; evalue=1.29e-18; confidence=weak
GO	GO:0042407 (cristae formation); GO:0061617 (MICOS complex)
KEGG	-
Pfam	PF09731 (Mitofilin)
InterPro	-
eggNOG	-
NR	GeneID:131001390

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057783753.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057783753.1`
3	Mitochondrion inner membrane	线粒体内膜	0.60000	`XP_057783753.1`
4	Mitochondrion outer membrane	线粒体外膜	0.20000	`XP_057783753.1`
5	Nucleus	细胞核	0.00000	`XP_057783753.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:15840994`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B41
`Chr8:15841748`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B132,B137
`Chr8:15842211`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B86,B91,C72
`Chr8:15842343`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B86,B91,C7,C72
`Chr8:15842583`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B27,C76
`Chr8:15842597`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B105,B115,B118,B14,B64
`Chr8:15843512`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C68
`Chr8:15843658`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B68
`Chr8:15843885`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B24,B52
`Chr8:15844773`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B74,C2

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783753.1

638 aa

319

638

Mitofilin

PF09731 Mitofilin 141-633 aa

XP_057783754.1

617 aa

308

617

Mitofilin

PF09731 Mitofilin 120-612 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783753.1`	Pfam	`PF09731`	Mitofilin	Family	141	633	2.4e-67	229.0	Mitochondrial inner membrane protein
`XP_057783754.1`	Pfam	`PF09731`	Mitofilin	Family	120	612	1.8e-67	229.4	Mitochondrial inner membrane protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057927770.1
TTGTATATATCTCAATTATAAAGCAGATAAGAAAAGTATTGGAGTTCAAAAACAAAACGAACCTTGAAAAAAAAAGAGAAATAATAATCAAAAGGGAAAAATCGTGTTGTCTTGTTTAACAACTCATCTCCACCTAGCTTCGACTATTTTTCCCTTCAAATTTTTCGCCTCTTCTTACGGGTCTGCAATTTTCTTCAAGACTATAAATACAGAATAAATCTTCTTCAACGCACTGCTGAATTTCAGAATCCAATTTCGCA...

XM_057927771.1
TCACTTCTACAGCTCGCATCTCGTAGTTCACTCAGTAGGCTTCCATTGCGAGCTACAACTCAGTTTCTGATGAAAGTATATTGGAGAGAATAGCTTTGATGCGATGTATTGGAAGATACCTTCATATCTTTCTTCCAGAAGGGCATTTTCTGTTTCTCAGAAAAATGGACCAAAAAAGCTTGATCCAGGAAGCAACGTCCCTGAACCTCAGAGTCGTGTACCAAAGATTCTCGCTGGAGGCCTTGCATTGGGTTCTGTTC...

CDS

2 records

下载 CDS FASTA

LOC131001390
ATGTTACGCAGGTCACTTCTACAGCTCGCATCTCGTAGTTCACTCAGTAGGCTTCCATTGCGAGCTACAACTCAGATACCTTCATATCTTTCTTCCAGAAGGGCATTTTCTGTTTCTCAGAAAAATGGACCAAAAAAGCTTGATCCAGGAAGCAACGTCCCTGAACCTCAGAGTCGTGTACCAAAGATTCTCGCTGGAGGCCTTGCATTGGGTTCTGTTCTCCTGGCTGCGTACTATTATGGTGCTCTTGATGAGTATAT...

LOC131001390
ATGTATTGGAAGATACCTTCATATCTTTCTTCCAGAAGGGCATTTTCTGTTTCTCAGAAAAATGGACCAAAAAAGCTTGATCCAGGAAGCAACGTCCCTGAACCTCAGAGTCGTGTACCAAAGATTCTCGCTGGAGGCCTTGCATTGGGTTCTGTTCTCCTGGCTGCGTACTATTATGGTGCTCTTGATGAGTATATTGGGAGGCAGAAGGAAAGCATCAGGGAATACACCAATGCTGGGATTGGTGATAAGGCTACAGA...

Protein

2 records

下载 Protein FASTA

XP_057783753.1
MLRRSLLQLASRSSLSRLPLRATTQIPSYLSSRRAFSVSQKNGPKKLDPGSNVPEPQSRVPKILAGGLALGSVLLAAYYYGALDEYIGRQKESIREYTNAGIGDKATEAFPGQKGTYNQPSGFSTIISGSSSGQSGESSTLVDHAKQDTETHADSIKTEEDKSFQEKVATVQTPVNVDHVERRDIPSVPQSSFSSDDETGKPAEESFDLKGGGLGADEPQHKAIETTTTVTSAENTFPDTEIKSVQREPTTTDNIQEVVQ...

XP_057783754.1
MYWKIPSYLSSRRAFSVSQKNGPKKLDPGSNVPEPQSRVPKILAGGLALGSVLLAAYYYGALDEYIGRQKESIREYTNAGIGDKATEAFPGQKGTYNQPSGFSTIISGSSSGQSGESSTLVDHAKQDTETHADSIKTEEDKSFQEKVATVQTPVNVDHVERRDIPSVPQSSFSSDDETGKPAEESFDLKGGGLGADEPQHKAIETTTTVTSAENTFPDTEIKSVQREPTTTDNIQEVVQGDILQKSDSLLGDYLLSDNSE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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