Red Sage Omics 丹参基因组信息平台
首页 基因查询 ID 对照表 功能注释 结构域预测 Pfam 基因组工具 蛋白互作 亚细胞定位 表达量 共表达 同源/共线性 GO/KEGG 注释 TF 结合位点 TF 靶基因 EMS 突变 JBrowse BLAST 下载 关于 帮助
数据资源
ID 对照表 功能注释 功能检索 次生代谢专题 文献证据 结构域预测 Pfam 同源/共线性
分析工具
基因组工具 引物设计 同源重组引物设计 核酸翻译 BLAST 蛋白互作 亚细胞定位 共表达 GO/KEGG 注释 功能检索
调控/突变
TF 结合位点 TF 靶基因 EMS 突变
帮助
关于 帮助 资源与版本
中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr08G002047

染色体: Chr08 坐标: 18311485-18315355 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr08G002047
名称SmilChr08G002047
描述pentatricopeptide repeat-containing protein At5g18475-like
染色体 / SeqIDChr08 / NC_080394.1
坐标与链方向18311485 - 18315355 / +

ID 对照

NCBI Gene IDLOC131001574
GeneID131001574
locus_tag-
NCBI NameLOC131001574
原始查询SmilChr08G002047

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At5g18475-like
产物pentatricopeptide repeat-containing protein At5g18475-like
ArabidopsisAT5G18475 (AT5G18475)
Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:2745987]
identity=54.9; qcov=0.896; evalue=0; confidence=high
RiceOs02g0468500
-
identity=43.4; qcov=0.904; evalue=6.84e-128; confidence=medium
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131001574

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 1.00000 XP_057784034.1
2 Nucleus 细胞核 0.00000 XP_057784034.1
3 Chromosome 染色体 0.00000 XP_057784034.1
4 Centromere 着丝粒 0.00000 XP_057784034.1
5 Chromatin 染色质 0.00000 XP_057784034.1

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057784034.1
510 aa
N
1
255
510
PPR_1
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
C
PF12854 PPR_1 195-227 aa PF17177 PPR_long 195-279 aa PF13812 PPR_3 196-243 aa PF13041 PPR_2 198-247 aa PF01535 PPR 202-229 aa PF12854 PPR_1 233-263 aa PF13041 PPR_2 234-284 aa PF01535 PPR 237-265 aa PF17177 PPR_long 254-381 aa PF13812 PPR_3 258-315 aa PF12854 PPR_1 268-299 aa PF13041 PPR_2 270-319 aa PF01535 PPR 274-303 aa PF23276 TPR_24 292-401 aa PF12854 PPR_1 301-334 aa PF13041 PPR_2 305-346 aa PF01535 PPR 310-337 aa PF13812 PPR_3 329-385 aa PF12854 PPR_1 337-369 aa PF13041 PPR_2 340-389 aa PF01535 PPR 343-373 aa PF12854 PPR_1 371-401 aa PF13041 PPR_2 376-424 aa PF01535 PPR 378-408 aa PF12854 PPR_1 407-438 aa PF01535 PPR 414-443 aa PF01535 PPR 484-508 aa
XP_057784035.1
510 aa
N
1
255
510
PPR_1
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
C
PF12854 PPR_1 195-227 aa PF17177 PPR_long 195-279 aa PF13812 PPR_3 196-243 aa PF13041 PPR_2 198-247 aa PF01535 PPR 202-229 aa PF12854 PPR_1 233-263 aa PF13041 PPR_2 234-284 aa PF01535 PPR 237-265 aa PF17177 PPR_long 254-381 aa PF13812 PPR_3 258-315 aa PF12854 PPR_1 268-299 aa PF13041 PPR_2 270-319 aa PF01535 PPR 274-303 aa PF23276 TPR_24 292-401 aa PF12854 PPR_1 301-334 aa PF13041 PPR_2 305-346 aa PF01535 PPR 310-337 aa PF13812 PPR_3 329-385 aa PF12854 PPR_1 337-369 aa PF13041 PPR_2 340-389 aa PF01535 PPR 343-373 aa PF12854 PPR_1 371-401 aa PF13041 PPR_2 376-424 aa PF01535 PPR 378-408 aa PF12854 PPR_1 407-438 aa PF01535 PPR 414-443 aa PF01535 PPR 484-508 aa
XP_057784036.1
510 aa
N
1
255
510
PPR_1
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
C
PF12854 PPR_1 195-227 aa PF17177 PPR_long 195-279 aa PF13812 PPR_3 196-243 aa PF13041 PPR_2 198-247 aa PF01535 PPR 202-229 aa PF12854 PPR_1 233-263 aa PF13041 PPR_2 234-284 aa PF01535 PPR 237-265 aa PF17177 PPR_long 254-381 aa PF13812 PPR_3 258-315 aa PF12854 PPR_1 268-299 aa PF13041 PPR_2 270-319 aa PF01535 PPR 274-303 aa PF23276 TPR_24 292-401 aa PF12854 PPR_1 301-334 aa PF13041 PPR_2 305-346 aa PF01535 PPR 310-337 aa PF13812 PPR_3 329-385 aa PF12854 PPR_1 337-369 aa PF13041 PPR_2 340-389 aa PF01535 PPR 343-373 aa PF12854 PPR_1 371-401 aa PF13041 PPR_2 376-424 aa PF01535 PPR 378-408 aa PF12854 PPR_1 407-438 aa PF01535 PPR 414-443 aa PF01535 PPR 484-508 aa
XP_057784037.1
510 aa
N
1
255
510
PPR_1
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
C
PF12854 PPR_1 195-227 aa PF17177 PPR_long 195-279 aa PF13812 PPR_3 196-243 aa PF13041 PPR_2 198-247 aa PF01535 PPR 202-229 aa PF12854 PPR_1 233-263 aa PF13041 PPR_2 234-284 aa PF01535 PPR 237-265 aa PF17177 PPR_long 254-381 aa PF13812 PPR_3 258-315 aa PF12854 PPR_1 268-299 aa PF13041 PPR_2 270-319 aa PF01535 PPR 274-303 aa PF23276 TPR_24 292-401 aa PF12854 PPR_1 301-334 aa PF13041 PPR_2 305-346 aa PF01535 PPR 310-337 aa PF13812 PPR_3 329-385 aa PF12854 PPR_1 337-369 aa PF13041 PPR_2 340-389 aa PF01535 PPR 343-373 aa PF12854 PPR_1 371-401 aa PF13041 PPR_2 376-424 aa PF01535 PPR 378-408 aa PF12854 PPR_1 407-438 aa PF01535 PPR 414-443 aa PF01535 PPR 484-508 aa
XP_057784038.1
510 aa
N
1
255
510
PPR_1
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
C
PF12854 PPR_1 195-227 aa PF17177 PPR_long 195-279 aa PF13812 PPR_3 196-243 aa PF13041 PPR_2 198-247 aa PF01535 PPR 202-229 aa PF12854 PPR_1 233-263 aa PF13041 PPR_2 234-284 aa PF01535 PPR 237-265 aa PF17177 PPR_long 254-381 aa PF13812 PPR_3 258-315 aa PF12854 PPR_1 268-299 aa PF13041 PPR_2 270-319 aa PF01535 PPR 274-303 aa PF23276 TPR_24 292-401 aa PF12854 PPR_1 301-334 aa PF13041 PPR_2 305-346 aa PF01535 PPR 310-337 aa PF13812 PPR_3 329-385 aa PF12854 PPR_1 337-369 aa PF13041 PPR_2 340-389 aa PF01535 PPR 343-373 aa PF12854 PPR_1 371-401 aa PF13041 PPR_2 376-424 aa PF01535 PPR 378-408 aa PF12854 PPR_1 407-438 aa PF01535 PPR 414-443 aa PF01535 PPR 484-508 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 195 227 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF17177 PPR_long Repeat 195 279 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784034.1 Pfam PF13812 PPR_3 Repeat 196 243 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784034.1 Pfam PF13041 PPR_2 Repeat 198 247 3.9e-96 315.7 PPR repeat family
XP_057784034.1 Pfam PF01535 PPR Repeat 202 229 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 233 263 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF13041 PPR_2 Repeat 234 284 3.9e-96 315.7 PPR repeat family
XP_057784034.1 Pfam PF01535 PPR Repeat 237 265 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF17177 PPR_long Repeat 254 381 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784034.1 Pfam PF13812 PPR_3 Repeat 258 315 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 268 299 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF13041 PPR_2 Repeat 270 319 3.9e-96 315.7 PPR repeat family
XP_057784034.1 Pfam PF01535 PPR Repeat 274 303 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF23276 TPR_24 Repeat 292 401 1.6e-24 87.0 Pentatricopeptide repeat-containing protein
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 301 334 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF13041 PPR_2 Repeat 305 346 3.9e-96 315.7 PPR repeat family
XP_057784034.1 Pfam PF01535 PPR Repeat 310 337 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF13812 PPR_3 Repeat 329 385 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 337 369 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF13041 PPR_2 Repeat 340 389 3.9e-96 315.7 PPR repeat family
XP_057784034.1 Pfam PF01535 PPR Repeat 343 373 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 371 401 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF13041 PPR_2 Repeat 376 424 3.9e-96 315.7 PPR repeat family
XP_057784034.1 Pfam PF01535 PPR Repeat 378 408 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF12854 PPR_1 Repeat 407 438 5e-87 286.0 PPR repeat
XP_057784034.1 Pfam PF01535 PPR Repeat 414 443 1.5e-64 210.5 PPR repeat
XP_057784034.1 Pfam PF01535 PPR Repeat 484 508 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 195 227 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF17177 PPR_long Repeat 195 279 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784035.1 Pfam PF13812 PPR_3 Repeat 196 243 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784035.1 Pfam PF13041 PPR_2 Repeat 198 247 3.9e-96 315.7 PPR repeat family
XP_057784035.1 Pfam PF01535 PPR Repeat 202 229 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 233 263 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF13041 PPR_2 Repeat 234 284 3.9e-96 315.7 PPR repeat family
XP_057784035.1 Pfam PF01535 PPR Repeat 237 265 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF17177 PPR_long Repeat 254 381 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784035.1 Pfam PF13812 PPR_3 Repeat 258 315 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 268 299 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF13041 PPR_2 Repeat 270 319 3.9e-96 315.7 PPR repeat family
XP_057784035.1 Pfam PF01535 PPR Repeat 274 303 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF23276 TPR_24 Repeat 292 401 1.6e-24 87.0 Pentatricopeptide repeat-containing protein
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 301 334 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF13041 PPR_2 Repeat 305 346 3.9e-96 315.7 PPR repeat family
XP_057784035.1 Pfam PF01535 PPR Repeat 310 337 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF13812 PPR_3 Repeat 329 385 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 337 369 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF13041 PPR_2 Repeat 340 389 3.9e-96 315.7 PPR repeat family
XP_057784035.1 Pfam PF01535 PPR Repeat 343 373 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 371 401 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF13041 PPR_2 Repeat 376 424 3.9e-96 315.7 PPR repeat family
XP_057784035.1 Pfam PF01535 PPR Repeat 378 408 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF12854 PPR_1 Repeat 407 438 5e-87 286.0 PPR repeat
XP_057784035.1 Pfam PF01535 PPR Repeat 414 443 1.5e-64 210.5 PPR repeat
XP_057784035.1 Pfam PF01535 PPR Repeat 484 508 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 195 227 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF17177 PPR_long Repeat 195 279 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784036.1 Pfam PF13812 PPR_3 Repeat 196 243 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784036.1 Pfam PF13041 PPR_2 Repeat 198 247 3.9e-96 315.7 PPR repeat family
XP_057784036.1 Pfam PF01535 PPR Repeat 202 229 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 233 263 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF13041 PPR_2 Repeat 234 284 3.9e-96 315.7 PPR repeat family
XP_057784036.1 Pfam PF01535 PPR Repeat 237 265 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF17177 PPR_long Repeat 254 381 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784036.1 Pfam PF13812 PPR_3 Repeat 258 315 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 268 299 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF13041 PPR_2 Repeat 270 319 3.9e-96 315.7 PPR repeat family
XP_057784036.1 Pfam PF01535 PPR Repeat 274 303 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF23276 TPR_24 Repeat 292 401 1.6e-24 87.0 Pentatricopeptide repeat-containing protein
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 301 334 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF13041 PPR_2 Repeat 305 346 3.9e-96 315.7 PPR repeat family
XP_057784036.1 Pfam PF01535 PPR Repeat 310 337 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF13812 PPR_3 Repeat 329 385 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 337 369 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF13041 PPR_2 Repeat 340 389 3.9e-96 315.7 PPR repeat family
XP_057784036.1 Pfam PF01535 PPR Repeat 343 373 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 371 401 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF13041 PPR_2 Repeat 376 424 3.9e-96 315.7 PPR repeat family
XP_057784036.1 Pfam PF01535 PPR Repeat 378 408 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF12854 PPR_1 Repeat 407 438 5e-87 286.0 PPR repeat
XP_057784036.1 Pfam PF01535 PPR Repeat 414 443 1.5e-64 210.5 PPR repeat
XP_057784036.1 Pfam PF01535 PPR Repeat 484 508 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 195 227 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF17177 PPR_long Repeat 195 279 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784037.1 Pfam PF13812 PPR_3 Repeat 196 243 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784037.1 Pfam PF13041 PPR_2 Repeat 198 247 3.9e-96 315.7 PPR repeat family
XP_057784037.1 Pfam PF01535 PPR Repeat 202 229 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 233 263 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF13041 PPR_2 Repeat 234 284 3.9e-96 315.7 PPR repeat family
XP_057784037.1 Pfam PF01535 PPR Repeat 237 265 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF17177 PPR_long Repeat 254 381 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784037.1 Pfam PF13812 PPR_3 Repeat 258 315 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 268 299 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF13041 PPR_2 Repeat 270 319 3.9e-96 315.7 PPR repeat family
XP_057784037.1 Pfam PF01535 PPR Repeat 274 303 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF23276 TPR_24 Repeat 292 401 1.6e-24 87.0 Pentatricopeptide repeat-containing protein
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 301 334 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF13041 PPR_2 Repeat 305 346 3.9e-96 315.7 PPR repeat family
XP_057784037.1 Pfam PF01535 PPR Repeat 310 337 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF13812 PPR_3 Repeat 329 385 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 337 369 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF13041 PPR_2 Repeat 340 389 3.9e-96 315.7 PPR repeat family
XP_057784037.1 Pfam PF01535 PPR Repeat 343 373 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 371 401 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF13041 PPR_2 Repeat 376 424 3.9e-96 315.7 PPR repeat family
XP_057784037.1 Pfam PF01535 PPR Repeat 378 408 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF12854 PPR_1 Repeat 407 438 5e-87 286.0 PPR repeat
XP_057784037.1 Pfam PF01535 PPR Repeat 414 443 1.5e-64 210.5 PPR repeat
XP_057784037.1 Pfam PF01535 PPR Repeat 484 508 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 195 227 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF17177 PPR_long Repeat 195 279 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784038.1 Pfam PF13812 PPR_3 Repeat 196 243 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784038.1 Pfam PF13041 PPR_2 Repeat 198 247 3.9e-96 315.7 PPR repeat family
XP_057784038.1 Pfam PF01535 PPR Repeat 202 229 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 233 263 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF13041 PPR_2 Repeat 234 284 3.9e-96 315.7 PPR repeat family
XP_057784038.1 Pfam PF01535 PPR Repeat 237 265 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF17177 PPR_long Repeat 254 381 2.5e-22 80.0 Pentacotripeptide-repeat region of PRORP
XP_057784038.1 Pfam PF13812 PPR_3 Repeat 258 315 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 268 299 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF13041 PPR_2 Repeat 270 319 3.9e-96 315.7 PPR repeat family
XP_057784038.1 Pfam PF01535 PPR Repeat 274 303 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF23276 TPR_24 Repeat 292 401 1.6e-24 87.0 Pentatricopeptide repeat-containing protein
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 301 334 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF13041 PPR_2 Repeat 305 346 3.9e-96 315.7 PPR repeat family
XP_057784038.1 Pfam PF01535 PPR Repeat 310 337 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF13812 PPR_3 Repeat 329 385 3.6e-40 136.6 Pentatricopeptide repeat domain
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 337 369 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF13041 PPR_2 Repeat 340 389 3.9e-96 315.7 PPR repeat family
XP_057784038.1 Pfam PF01535 PPR Repeat 343 373 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 371 401 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF13041 PPR_2 Repeat 376 424 3.9e-96 315.7 PPR repeat family
XP_057784038.1 Pfam PF01535 PPR Repeat 378 408 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF12854 PPR_1 Repeat 407 438 5e-87 286.0 PPR repeat
XP_057784038.1 Pfam PF01535 PPR Repeat 414 443 1.5e-64 210.5 PPR repeat
XP_057784038.1 Pfam PF01535 PPR Repeat 484 508 1.5e-64 210.5 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA
XM_057928053.1
GCAATTCTTACGCTTACGCACACAGACACAGACACTCCTATTTTTCTTTTTCACAAAACCCTCGTCCCTCGCTCACGTACCGTCCACCGTCCGCCGGCCGCCGCCCTCCACCCGCACTGTAGCAGCCGTCGCCCTGCTTGTCCGCCGGCGCCTTCGCCCTCCTGTTTTTTTGTTTCATATTTGGTCTTGCCAATCCTCTGTTGCATTATTTTCCGGTAGGTGATAACTTCTCTAGATGATATAATCGGGGATCCAGTTAT...
XM_057928051.1
TACGCTTACGCACACAGACACAGACACTCCTATTTTTCTTTTTCACAAAACCCTCGTCCCTCGCTCACGTACCGTCCACCGTCCGCCGGCCGCCGCCCTCCACCCGCACTGTAGCAGCCGTCGCCCTGCTTGTCCGCCGGCGCCTTCGCCCTCCTGTTTTTTTGTTTCATATTTGGTCTTGCCAATCCTCTGTTGCATTATTTTCCGGTGAGTTGTATTTTATTTTATTCTCGCAAATGCTGGCTATATTTTGATGCATT...

CDS

5 records

下载 CDS FASTA
LOC131001574
ATGAACGTTGTTTCCAGAAAGAGCCGCCACTTATTATCTGTCGAACCATTATCATCATCTTCAGCTCAGTTCGTCTCTCCTCTCCAAAACCTGAAGGTCTCCACAGACAGAGGAGATACACCTGCTGAAACTACAGCTACGGAAACAGTATTTACTAGGAAAAGCAAATACATTTGCCATGAGTCCGCCATCAACTTCATAAAACGTGAGAAAAACCCAGAAAACGCGTTGGAAATATTTAATAAAGTATCATCGCAGAG...
LOC131001574
ATGAACGTTGTTTCCAGAAAGAGCCGCCACTTATTATCTGTCGAACCATTATCATCATCTTCAGCTCAGTTCGTCTCTCCTCTCCAAAACCTGAAGGTCTCCACAGACAGAGGAGATACACCTGCTGAAACTACAGCTACGGAAACAGTATTTACTAGGAAAAGCAAATACATTTGCCATGAGTCCGCCATCAACTTCATAAAACGTGAGAAAAACCCAGAAAACGCGTTGGAAATATTTAATAAAGTATCATCGCAGAG...

Protein

5 records

下载 Protein FASTA
XP_057784034.1
MNVVSRKSRHLLSVEPLSSSSAQFVSPLQNLKVSTDRGDTPAETTATETVFTRKSKYICHESAINFIKREKNPENALEIFNKVSSQRGFQHNNSTYGIILHKLAQCKKYQALDAVLHRMTYETCKFHEGIFLNLMKHFSKASKHERVLEMFYSILPIVRSQPSLKAISTCLNLLVDANETDLARKFLLSTRKDFHLEPNTCIFNILVKHHCRKGDIESSFGVMKEMEKSEVSTPNLITYSTVIDGLCASGRLEDAIQLFE...
XP_057784035.1
MNVVSRKSRHLLSVEPLSSSSAQFVSPLQNLKVSTDRGDTPAETTATETVFTRKSKYICHESAINFIKREKNPENALEIFNKVSSQRGFQHNNSTYGIILHKLAQCKKYQALDAVLHRMTYETCKFHEGIFLNLMKHFSKASKHERVLEMFYSILPIVRSQPSLKAISTCLNLLVDANETDLARKFLLSTRKDFHLEPNTCIFNILVKHHCRKGDIESSFGVMKEMEKSEVSTPNLITYSTVIDGLCASGRLEDAIQLFE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

JBrowse

跳转到基因组浏览器