当前解析结果
SmilChr08G002052| 统一新 Gene ID | SmilChr08G002052 |
|---|---|
| 名称 | SmilChr08G002052 |
| 描述 | uncharacterized SmilChr08G002052 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 18373031 - 18374559 / + |
| NCBI Gene ID | LOC131001640 |
|---|---|
| GeneID | 131001640 |
| locus_tag | - |
| NCBI Name | LOC131001640 |
| 原始查询 | SmilChr08G002052 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Chalcone-flavanone isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:836755]; symbol=AT5G66230; hit=AT5G66230; species=arabidopsis; confidence=high |
| 产物 | Chalcone-flavanone isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:836755]; symbol=AT5G66230; hit=AT5G66230; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G66230 (AT5G66230)Chalcone-flavanone isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:836755] identity=46.7; qcov=1.08; evalue=1.7e-65; confidence=high |
| Rice | Os10g0577400 (OSJNBa0035H01.6)- identity=39.6; qcov=1.1; evalue=1.88e-35; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001640 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057784175.1 |
| 2 | Chromosome | 染色体 | 0.60000 | XP_057784175.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057784175.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057784175.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057784175.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:18373301 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A14 |
Chr8:18373433 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B48 |
Chr8:18373457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,B52 |
Chr8:18373585 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B70,C61 |
Chr8:18374144 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B120,C41 |
Chr8:18374331 |
G |
GA |
1bp_insertion | frameshift_variant | 2 | B108,C39 |
Chr8:18374331 |
G |
GA |
1bp_insertion | CDS_variant | 2 | B108,C39 |
Chr8:18374334 |
C |
CA |
1bp_insertion | frameshift_variant | 2 | B82,C48 |
Chr8:18374334 |
C |
CA |
1bp_insertion | CDS_variant | 2 | B82,C48 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。