Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G002175`

染色体: Chr08 坐标: 19668652-19675879 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G002175`
名称	SmilChr08G002175
描述	plastidic glucose transporter 4-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	19668652 - 19675879 / `+`

ID 对照

NCBI Gene ID	`LOC131001566`
GeneID	`131001566`
locus_tag	`-`
NCBI Name	`LOC131001566`
原始查询	`SmilChr08G002175`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	plastidic glucose transporter 4-like
产物	plastidic glucose transporter 4-like
Arabidopsis	`AT5G16150` (PGLCT) plastidic GLC translocator [Source:NCBI gene (formerly Entrezgene);Acc:831472] identity=77.3; qcov=1.01; evalue=0; confidence=high
Rice	`Os01g0133400` (OsPGLCT) - identity=82.7; qcov=0.881; evalue=0; confidence=high
GO	GO:0005351 (carbohydrate:proton symporter activity); GO:0008643 (carbohydrate transport); GO:0016020 (membrane); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00083 (Sugar_tr); PF07690 (MFS_1)
InterPro	-
eggNOG	-
NR	GeneID:131001566

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057784018.1`
2	Chloroplast membrane	叶绿体膜	1.00000	`XP_057784018.1`
3	Nucleus	细胞核	0.00000	`XP_057784018.1`
4	Chromosome	染色体	0.00000	`XP_057784018.1`
5	Centromere	着丝粒	0.00000	`XP_057784018.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:19669310`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B108,B42,B43
`Chr8:19669331`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B56,B96,C39
`Chr8:19669496`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B1,B104,B91,C82,D11
`Chr8:19671068`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B44
`Chr8:19672889`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B140,C82
`Chr8:19672906`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B1,B91,C82,D11
`Chr8:19673123`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B72,B91,C26,C82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057784018.1

537 aa

268

537

Sugar_tr

MFS_1

PF00083 Sugar_tr 102-532 aa PF07690 MFS_1 104-445 aa

XP_057784019.1

537 aa

268

537

Sugar_tr

MFS_1

PF00083 Sugar_tr 102-532 aa PF07690 MFS_1 104-445 aa

XP_057784020.1

537 aa

268

537

Sugar_tr

MFS_1

PF00083 Sugar_tr 102-532 aa PF07690 MFS_1 104-445 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057784018.1`	Pfam	`PF00083`	Sugar_tr	Family	102	532	1.1e-106	358.1	Sugar (and other) transporter
`XP_057784018.1`	Pfam	`PF07690`	MFS_1	Family	104	445	1.8e-31	110.1	Major Facilitator Superfamily
`XP_057784019.1`	Pfam	`PF00083`	Sugar_tr	Family	102	532	1.1e-106	358.1	Sugar (and other) transporter
`XP_057784019.1`	Pfam	`PF07690`	MFS_1	Family	104	445	1.8e-31	110.1	Major Facilitator Superfamily
`XP_057784020.1`	Pfam	`PF00083`	Sugar_tr	Family	102	532	1.1e-106	358.1	Sugar (and other) transporter
`XP_057784020.1`	Pfam	`PF07690`	MFS_1	Family	104	445	1.8e-31	110.1	Major Facilitator Superfamily

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057928037.1
AGTAATAAGAAATAACCTCCAGCTATAATCACATAATTCTGTTCTGTTAATAGTAATACATCCTTATCCATAAAAATAAATGAATGATTCTACAGTATCGGATTTCTTTTTTGTTCTTTGGTATTTTGGGATCTCAATAATCGGAAAACCATATTTGGATATGTTTAAAATTTTAACAGCAAAAATATATCCGAATAAATTACAGATAATCCGAACAAATCTATGATTGATTTATAGCAGTCTGAGCTTCCGGACTCGTC...

XM_057928035.1
ATTCTGTTCTGTTAATAGTAATACATCCTTATCCATAAAAATAAATGAATGATTCTACAGTATCGGATTTCTTTTTTGTTCTTTGGTATTTTGGGATCTCAATAATCGGAAAACCATATTTGGATATGTTTAAAATTTTAACAGCAAAAATATATCCGAATAAATTACAGATAATCCGAACAAATCTATGATTGATTTATAGCAGTCTGAGCTTCCGGACTCGTCGAAGTAAGCTGCCAAGTGAGACGTTACTCCCCACG...

CDS

3 records

下载 CDS FASTA

LOC131001566
ATGGAAGCTTCCGTGTACACCGTCAACACAAAATCGTGCTTGGGCCTCCACAGCCGCAGGATTTTGCCGAGATTAGCACTCGGTGTAGGATGCAGTCTTCGCGCGACGAAGAGGAATAATGCTTTGAGGCTTAGCTGCGGTTCGACTTCAATGGGGAGAGCTGGAGGTAGTATTCAGAGTCTGTTCGGATCATCGGCCAAGGCTAGATTAGTCAGAGCTCAAGCTTCTGAAGGAGATATTGAGAATGTTGCTCCTGCGAA...

Protein

3 records

下载 Protein FASTA

XP_057784018.1
MEASVYTVNTKSCLGLHSRRILPRLALGVGCSLRATKRNNALRLSCGSTSMGRAGGSIQSLFGSSAKARLVRAQASEGDIENVAPAKIPVTSSGSVLPYVGVACLGAFLFGYHLGVVNGALEYLAKDLGIVENTVLQGWVVSTLLAGATVGSFTGGSLADKFGRTKTFILDAVPLAVGAFLCATAQNIETMIIGRLLAGIGIGVSSAIVPLYISEISPTEIRGTLGSVNQLFICIGILAALVAGLPLAGNPLWWRSMFGV...

XP_057784019.1
MEASVYTVNTKSCLGLHSRRILPRLALGVGCSLRATKRNNALRLSCGSTSMGRAGGSIQSLFGSSAKARLVRAQASEGDIENVAPAKIPVTSSGSVLPYVGVACLGAFLFGYHLGVVNGALEYLAKDLGIVENTVLQGWVVSTLLAGATVGSFTGGSLADKFGRTKTFILDAVPLAVGAFLCATAQNIETMIIGRLLAGIGIGVSSAIVPLYISEISPTEIRGTLGSVNQLFICIGILAALVAGLPLAGNPLWWRSMFGV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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