Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G002212`

染色体: Chr08 坐标: 20086975-20090457 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G002212`
名称	SmilChr08G002212
描述	probable fructokinase-6, chloroplastic
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	20086975 - 20090457 / `-`

ID 对照

NCBI Gene ID	`LOC131001745`
GeneID	`131001745`
locus_tag	`-`
NCBI Name	`LOC131001745`
原始查询	`SmilChr08G002212`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable fructokinase-6, chloroplastic
产物	probable fructokinase-6%2C chloroplastic
Arabidopsis	`AT1G66430` (AT1G66430) pfkB-like carbohydrate kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:842961] identity=81.1; qcov=0.954; evalue=0; confidence=high
Rice	`Os06g0232200` - identity=75.8; qcov=0.962; evalue=0; confidence=high
GO	GO:0005829 (cytosol); GO:0006000 (fructose metabolic process); GO:0008865 (fructokinase activity); GO:0009570 (chloroplast stroma)
KEGG	smil00051 (Fructose and mannose metabolism - Salvia miltiorrhiza (redroot sage)); smil00500 (Starch and sucrose metabolism - Salvia miltiorrhiza (redroot sage)); smil00520 (Amino sugar and nucleotide sugar metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01250 (Biosynthesis of nucleotide sugars - Salvia miltiorrhiza (redroot sage))
Pfam	PF00294 (PfkB)
InterPro	-
eggNOG	-
NR	GeneID:131001745

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057784293.1`
2	Cytoplasm	细胞质	1.00000	`XP_057784294.1`
3	Cytosol	细胞质基质	1.00000	`XP_057784294.1`
4	Chloroplast stroma	叶绿体基质	0.80000	`XP_057784293.1`
5	Nucleus	细胞核	0.20000	`XP_057784294.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:20088679`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B105,C42
`Chr8:20088952`	`TA`	`T`	1bp_deletion	frameshift_variant	1	B38
`Chr8:20088952`	`TA`	`T`	1bp_deletion	CDS_variant	1	B38
`Chr8:20089486`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B94,C5

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057784293.1

383 aa

192

383

PfkB

PF00294 PfkB 64-370 aa

XP_057784294.1

366 aa

183

366

PfkB

PF00294 PfkB 47-353 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057784293.1`	Pfam	`PF00294`	PfkB	Domain	64	370	1.3e-74	252.0	pfkB family carbohydrate kinase
`XP_057784294.1`	Pfam	`PF00294`	PfkB	Domain	47	353	1.1e-74	252.2	pfkB family carbohydrate kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057928310.1
TCTCTCTTCGCAGACGTTCCCTTAACTCAGCCACTAACTATCCCAACCATTATTGCTCTTCTTAATTTTCTTTTCTTTTAAGAAAAAATAAAATAAAAATTGGGGGTCAGTAAAATTATCTCCAAATTTATGGAGTACTTATTTGTTTTGGAGGAAACTGTTTAAGAATTCTTTCTACTTCGATTAATCCAAGGTTGTCTTGCCGCGTCCCCTTGCTTTAATCCATAAATTCTAACGCCCAAAAAGGAAAAGAAAAAAAG...

XM_057928311.1
CGTTCCCTTAACTCAGCCACTAACTATCCCAACCATTATTGCTCTTCTTAATTTTCTTTTCTTTTAAGAAAAAATAAAATAAAAATTGGGGGTCAGTAAAATTATCTCCAAATTTATGGAGTACTTATTTGTTTTGGAGGAAACTGTTTAAGAATTCTTTCTACTTCGATTAATCCAAGGTTGTCTTGCCGCGTCCCCTTGCTTTAATCCATAAATTCTAACGCCCAAAAAGGAAAAGAAAAAAAGAATTAATCGGGCCC...

CDS

2 records

下载 CDS FASTA

LOC131001745
ATGGCTCTGCATAGTGCTGCCGTGAGCTTCTGCTGTGTCTCGTTGAACCATCAAGCTTCTTTCCTCAGGCAATGCAGTGTCAAATCATCAAGATTCTCTTCGCCCTCTTCGGTTTCGCTTCCAAGATTCAGAATTCAAGGGAAAGCAGTAGAAAGTGGTAATGGCCCGTTAGAAACGGAGGAGTCGTCTCTTGTGGTTTGCTTCGGGGAAATGCTTATCGATTTTGTGCCAACCACAAGTGGACTCTCTTTGGCTGAAGC...

LOC131001745
ATGCAGTGTCAAATCATCAAGATTCTCTTCGCCCTCTTCGGTTTCGCTTCCAAGATTCAGAATTCAAGTCTAATTACTTGGTTCATAGGGAAAGCAGTAGAAAGTGGTAATGGCCCGTTAGAAACGGAGGAGTCGTCTCTTGTGGTTTGCTTCGGGGAAATGCTTATCGATTTTGTGCCAACCACAAGTGGACTCTCTTTGGCTGAAGCACCGGCTTTTAAGAAAGCTCCTGGAGGTGCACCTGCTAATGTGGCTGTTGG...

Protein

2 records

下载 Protein FASTA

XP_057784293.1
MALHSAAVSFCCVSLNHQASFLRQCSVKSSRFSSPSSVSLPRFRIQGKAVESGNGPLETEESSLVVCFGEMLIDFVPTTSGLSLAEAPAFKKAPGGAPANVAVGIARLGGASAFIGKVGEDEFGYMLANILKENNVNNEGMRFDPGARTALAFVTLRKDGEREFMFYRNPSADMLLQEAELDFEMIRKAKIFHYGSISLITEPCKSAHIAAMKAAKDAGVILSYDPNLRLPLWPSAESAREGILSIWDTADIIKISEEEI...

XP_057784294.1
MQCQIIKILFALFGFASKIQNSSLITWFIGKAVESGNGPLETEESSLVVCFGEMLIDFVPTTSGLSLAEAPAFKKAPGGAPANVAVGIARLGGASAFIGKVGEDEFGYMLANILKENNVNNEGMRFDPGARTALAFVTLRKDGEREFMFYRNPSADMLLQEAELDFEMIRKAKIFHYGSISLITEPCKSAHIAAMKAAKDAGVILSYDPNLRLPLWPSAESAREGILSIWDTADIIKISEEEICFLTQGEDPYDDNVVRK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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