Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G002371`

染色体: Chr08 坐标: 22524449-22531504 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G002371`
名称	SmilChr08G002371
描述	sterol 3-beta-glucosyltransferase UGT80A2-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	22524449 - 22531504 / `+`

ID 对照

NCBI Gene ID	`LOC131001889`
GeneID	`131001889`
locus_tag	`-`
NCBI Name	`LOC131001889`
原始查询	`SmilChr08G002371`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	sterol 3-beta-glucosyltransferase UGT80A2-like
产物	sterol 3-beta-glucosyltransferase UGT80A2-like
Arabidopsis	`AT3G07020` (SGT) UDP-Glycosyltransferase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819887] identity=70.9; qcov=0.869; evalue=0; confidence=high
Rice	`Os04g0131900` - identity=71.8; qcov=0.859; evalue=0; confidence=high
GO	GO:0005975 (carbohydrate metabolic process); GO:0008194 (UDP-glycosyltransferase activity); GO:0016758 (hexosyltransferase activity); GO:0030259 (GO:0030259)
KEGG	-
Pfam	PF03033 (Glyco_transf_28); PF06722 (EryCIII-like_C)
InterPro	-
eggNOG	-
NR	GeneID:131001889

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057784506.1`
2	Nucleus	细胞核	0.00000	`XP_057784506.1`
3	Chromosome	染色体	0.00000	`XP_057784506.1`
4	Centromere	着丝粒	0.00000	`XP_057784506.1`
5	Chromatin	染色质	0.00000	`XP_057784506.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:22524748`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A18,A20,A25,B136,B91
`Chr8:22526130`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr8:22526548`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr8:22527300`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B13
`Chr8:22528285`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr8:22528741`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B1,C14
`Chr8:22529208`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B83
`Chr8:22529269`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B131
`Chr8:22529290`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B90,B92
`Chr8:22530601`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr8:22531258`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C59

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057784506.1

617 aa

308

617

Glyco_transf_28

EryCIII-like_C

PF03033 Glyco_transf_28 166-309 aa PF06722 EryCIII-like_C 479-571 aa

XP_057784507.1

610 aa

305

610

Glyco_transf_28

EryCIII-like_C

PF03033 Glyco_transf_28 166-309 aa PF06722 EryCIII-like_C 466-564 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057784506.1`	Pfam	`PF03033`	Glyco_transf_28	Family	166	309	9.3e-32	110.7	Glycosyltransferase family 28 N-terminal domain
`XP_057784506.1`	Pfam	`PF06722`	EryCIII-like_C	Domain	479	571	3.8e-08	34.1	Erythromycin biosynthesis protein CIII-like, C-terminal domain
`XP_057784507.1`	Pfam	`PF03033`	Glyco_transf_28	Family	166	309	8.9e-32	110.8	Glycosyltransferase family 28 N-terminal domain
`XP_057784507.1`	Pfam	`PF06722`	EryCIII-like_C	Domain	466	564	8.5e-12	46.0	Erythromycin biosynthesis protein CIII-like, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057928524.1
AACAACCAGAATCAAACCACCTTCCTGAAACAACACACGAATCAGAATCAAGCTTTCTTCAACACCATTTTTTTTTTTGCATTATCGAACAAGTTTTCAAGGGGCCAAGGAATTAGCAAGTTTCTGCACCCGCCCCACCCCACCCCACCTTTTCCACTTTACTCACATTTGCATTGCATGCATGAAAAAAACCAGGGCGTCATCTTTTTCGAGTGAATGAAGGGAGAAAAGAAGAAGTGACGTCCGTGTTGCTTTTTCAC...

XM_057928523.1
GAATTAGCAAGTTTCTGCACCCGCCCCACCCCACCCCACCTTTTCCACTTTACTCACATTTGCATTGCATGCATGAAAAAAACCAGGGCGTCATCTTTTTCGAGTGAATGAAGGGAGAAAAGAAGAAGTGACGTCCGTGTTGCTTTTTCACAAAAAATTGAGTTTTTGGGCACCGACCGTCGTAATGGCGGAGGTTCCTGTCGATTTTGAGGTGGAGATAGAGAGAGAAAATGGAGATGAGAGGGACAGCAATGGTGCTG...

CDS

2 records

下载 CDS FASTA

LOC131001889
ATGGCGGAGGTTCCTGTCGATTTTGAGGTGGAGATAGAGAGAGAAAATGGAGATGAGAGGGACAGCAATGGTGCTGATGGATTGAAGAAGAGTGAGGGCAGCAATGGGGTTTCGCGGGATCATCGCAGGTTGAGTTATTCAGGATCGGTTGACAGGAATCTTTGCAGACAGAAATCTGGATGCATGGAGAAGTCAGCAAAACAGCATTCGGATCCTACATCCAGTCATCTTAATGGGATTGGGGAAAATAAACAGAACCA...

Protein

2 records

下载 Protein FASTA

XP_057784506.1
MAEVPVDFEVEIERENGDERDSNGADGLKKSEGSNGVSRDHRRLSYSGSVDRNLCRQKSGCMEKSAKQHSDPTSSHLNGIGENKQNHSIVLAKQFFDINVPSKKKLKMLNRLATVQNDGTVKLDIPGDISVSNQPLELGTGETHRGDGDKEPGDTEDAISLPPLQIVMLIVGTRGDVQPFVAIGKRLQADGHRVRLATHSNFKDFVLTSGLEFYPLGGDPKVLAAYMVKNKGFLPSGPSEIQIQRSQIKDIIFSLHRACK...

XP_057784507.1
MAEVPVDFEVEIERENGDERDSNGADGLKKSEGSNGVSRDHRRLSYSGSVDRNLCRQKSGCMEKSAKQHSDPTSSHLNGIGENKQNHSIVLAKQFFDINVPSKKKLKMLNRLATVQNDGTVKLDIPGDISVSNQPLELGTGETHRGDGDKEPGDTEDAISLPPLQIVMLIVGTRGDVQPFVAIGKRLQADGHRVRLATHSNFKDFVLTSGLEFYPLGGDPKVLAAYMVKNKGFLPSGPSEIQIQRSQIKDIIFSLHRACK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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