当前解析结果
SmilChr08G002387| 统一新 Gene ID | SmilChr08G002387 |
|---|---|
| 名称 | SmilChr08G002387 |
| 描述 | uncharacterized SmilChr08G002387 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 22637996 - 22639082 / - |
| NCBI Gene ID | LOC131001905 |
|---|---|
| GeneID | 131001905 |
| locus_tag | - |
| NCBI Name | LOC131001905 |
| 原始查询 | SmilChr08G002387 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831206]; symbol=AT5G13620; hit=AT5G13620; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831206]; symbol=AT5G13620; hit=AT5G13620; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G13620 (AT5G13620)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831206] identity=37.1; qcov=0.96; evalue=1.31e-51; confidence=medium |
| Rice | Os07g0274300- identity=25.1; qcov=1.01; evalue=4.69e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001905 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057784523.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057784523.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057784523.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057784523.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057784523.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:22638056 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:22638063 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr8:22638192 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr8:22638241 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A3 |
Chr8:22638425 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | B124 |
Chr8:22638425 |
TC |
T |
1bp_deletion | CDS_variant | 1 | B124 |
Chr8:22638634 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B115,C45,C80,D4 |
Chr8:22638718 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C43,C71,D2 |
Chr8:22638787 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
Chr8:22638789 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B5,B93,C19,C77 |
Chr8:22638804 |
A |
AGT |
2bp_insertion | frameshift_variant | 22 | A10,A20,A5,A6,B135,B136,B137,B139,B14,B16,B27,B45,B76,B84,B99,C18,C24,C28,C43,C44,C64,C71 |
Chr8:22638826 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。