当前解析结果
SmilChr08G002392| 统一新 Gene ID | SmilChr08G002392 |
|---|---|
| 名称 | SmilChr08G002392 |
| 描述 | uncharacterized SmilChr08G002392 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 22684489 - 22686279 / - |
| NCBI Gene ID | LOC131001910 |
|---|---|
| GeneID | 131001910 |
| locus_tag | - |
| NCBI Name | LOC131001910 |
| 原始查询 | SmilChr08G002392 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ureidoglycolate hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:818155]; symbol=AT2G35820; hit=AT2G35820; species=arabidopsis; confidence=high |
| 产物 | ureidoglycolate hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:818155]; symbol=AT2G35820; hit=AT2G35820; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G35820 (AT2G35820)ureidoglycolate hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:818155] identity=65.4; qcov=0.74; evalue=6.94e-88; confidence=high |
| Rice | Os01g0833200- identity=64.6; qcov=0.736; evalue=8.11e-78; confidence=high |
| GO | GO:0004848 (ureidoglycolate hydrolase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001910 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057784537.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 0.60000 | XP_057784537.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057784537.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057784537.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057784537.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:22684872 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B132,B27 |
Chr8:22684991 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B99,C87 |
Chr8:22685002 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B103,B135,C61,C62 |
Chr8:22685970 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B22,C59,D2 |
Chr8:22686015 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A4,B131,B64,D11 |
Chr8:22686159 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B15,B41,C15,C81 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。