当前解析结果
SmilChr08G002459| 统一新 Gene ID | SmilChr08G002459 |
|---|---|
| 名称 | SmilChr08G002459 |
| 描述 | homeobox-leucine zipper protein GLABRA 2-like |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 23410932 - 23411907 / + |
| NCBI Gene ID | LOC131001978 |
|---|---|
| GeneID | 131001978 |
| locus_tag | - |
| NCBI Name | LOC131001978 |
| 原始查询 | SmilChr08G002459 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | homeobox-leucine zipper protein GLABRA 2-like |
| 产物 | homeobox-leucine zipper protein GLABRA 2-like |
| Arabidopsis | AT1G79840 (GL2)HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:844323] identity=47.5; qcov=0.945; evalue=1.35e-16; confidence=low |
| Rice | Os01g0760800 (Roc9(t))- identity=45.3; qcov=0.921; evalue=8.04e-16; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001978 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057784625.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057784625.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057784625.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057784625.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057784625.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:23411462 |
C |
T |
EMS_canonical_SNV | stop_gained | 4 | B3,C33,C6,C79 |
Chr8:23411462 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B3,C33,C6,C79 |
Chr8:23411476 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B11,C10 |
Chr8:23411506 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A10,B11,C44,C9 |
Chr8:23411509 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B81,B94 |
Chr8:23411538 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A10,B11,C9 |
Chr8:23411540 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B63,B85 |
Chr8:23411559 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B69,C58,C75 |
Chr8:23411647 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,B63 |
Chr8:23411662 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B10 |
Chr8:23411684 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | C10 |
Chr8:23411684 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。