当前解析结果
SmilChr08G002578| 统一新 Gene ID | SmilChr08G002578 |
|---|---|
| 名称 | SmilChr08G002578 |
| 描述 | uncharacterized SmilChr08G002578 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 25105044 - 25121864 / - |
| NCBI Gene ID | LOC130997214 |
|---|---|
| GeneID | 130997214 |
| locus_tag | - |
| NCBI Name | LOC130997214 |
| 原始查询 | SmilChr08G002578 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | EIP10; symbol=EIP10; hit=Os01g0819900; species=rice; confidence=high |
| 产物 | EIP10; symbol=EIP10; hit=Os01g0819900; species=rice; confidence=high |
| Arabidopsis | AT2G40730 (CTEXP)kinase family with ARM repeat domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:818668] identity=75.3; qcov=1; evalue=0; confidence=high |
| Rice | Os01g0819900 (EIP10)- identity=71.1; qcov=1.01; evalue=0; confidence=high |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997214 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057778448.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057778448.1 |
| 3 | Trans-golgi network | Trans-golgi network | 0.60000 | XP_057778448.1 |
| 4 | Cytoplasmic vesicle | 细胞质囊泡 | 0.40000 | XP_057778448.1 |
| 5 | Cytosol | 细胞质基质 | 0.40000 | XP_057778448.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:25105629 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A2,B107,C46 |
Chr8:25106283 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C22 |
Chr8:25107626 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A9 |
Chr8:25109637 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C87 |
Chr8:25109638 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A2,B107,C46 |
Chr8:25110462 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B123 |
Chr8:25110713 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr8:25111113 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C13,C39,C83 |
Chr8:25113272 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:25115813 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A9,B38,B39,C39 |
Chr8:25117270 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr8:25117274 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。