当前解析结果
SmilChr08G002724| 统一新 Gene ID | SmilChr08G002724 |
|---|---|
| 名称 | SmilChr08G002724 |
| 描述 | cytochrome P450 703A2 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 26867492 - 26869217 / + |
| NCBI Gene ID | LOC130997352 |
|---|---|
| GeneID | 130997352 |
| locus_tag | - |
| NCBI Name | LOC130997352 |
| 原始查询 | SmilChr08G002724 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cytochrome P450 703A2 |
| 产物 | cytochrome P450 703A2 |
| Arabidopsis | AT1G01280 (CYP703A2)cytochrome P450, family 703, subfamily A, polypeptide 2 [Source:NCBI gene (formerly Entrezgene);Acc:839470] identity=73.8; qcov=0.99; evalue=0; confidence=high |
| Rice | Os08g0131100 (CYP703A3)- identity=72; qcov=0.996; evalue=0; confidence=high |
| GO | GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding) |
| KEGG | - |
| Pfam | PF00067 (p450) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997352 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057778627.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057778627.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057778627.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057778627.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057778627.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:26867699 |
C |
CA |
1bp_insertion | frameshift_variant | 46 | A15,A2,A20,A25,A4,A9,B101,B111,B117,B12,B122,B134,B140,B16,B20,B25,B37,B38,B39,B53,B66,B70,B74,B97,B98,C13,C14,C2,C20,C22,C4,C40,C44,C49,C50,C51,C55,C63,C67,C7,C73,C76,C82,D2,D7,D8 |
Chr8:26867701 |
AG |
A |
1bp_deletion | frameshift_variant | 46 | A15,A2,A20,A25,A4,A9,B101,B111,B117,B12,B122,B134,B140,B16,B20,B25,B37,B38,B39,B53,B66,B70,B74,B97,B98,C13,C14,C2,C20,C22,C4,C40,C44,C49,C50,C51,C55,C63,C67,C7,C73,C76,C82,D2,D7,D8 |
Chr8:26867869 |
TA |
T |
1bp_deletion | frameshift_variant | 135 | A1,A15,A18,A2,A20,A25,A4,A9,B1,B10,B101,B102,B104,B105,B108,B109,B111,B113,B117,B12,B120,B122,B123,B124,B127,B128,B13,B131,B132,B133,B134,B136,B140,B15,B16,B2,B20,B21,B22,B23,B25,B28,B29,B3,B30,B31,B33,B34,B37,B38,B39,B40,B41,B46,B47,B48,B49,B53,B55,B56,B58,B60,B63,B65,B66,B67,B68,B7,B70,B71,B72,B74,B79,B8,B81,B85,B87,B88,B90,B92,B96,B97,B98,B99,C1,C10,C13,C14,C15,C18,C2,C20,C22,C23,C27,C29,C3,C32,C33,C35,C39,C4,C40,C41,C46,C49,C50,C51,C55,C57,C59,C60,C62,C63,C64,C66,C67,C68,C7,C73,C74,C76,C79,C8,C80,C81,C82,C83,C87,D10,D2,D4,D6,D7,D8 |
Chr8:26868044 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B78,C45,C80,D11,D4 |
Chr8:26868084 |
CT |
C |
1bp_deletion | frameshift_variant | 78 | A15,A18,A2,A20,A25,A4,A9,B1,B101,B102,B104,B108,B109,B111,B113,B117,B12,B120,B122,B124,B132,B133,B134,B140,B15,B16,B2,B20,B21,B22,B25,B28,B30,B37,B38,B39,B48,B49,B53,B56,B68,B70,B72,B74,B88,B96,B97,B98,B99,C1,C13,C14,C15,C2,C20,C22,C39,C4,C40,C41,C44,C46,C49,C50,C51,C63,C64,C66,C67,C7,C76,C82,C83,C87,D2,D6,D7,D8 |
Chr8:26868086 |
T |
TA |
1bp_insertion | frameshift_variant | 78 | A15,A18,A2,A20,A25,A4,A9,B1,B101,B102,B104,B108,B109,B111,B113,B12,B120,B122,B124,B132,B133,B134,B140,B15,B16,B2,B20,B21,B22,B25,B28,B30,B37,B38,B39,B41,B48,B49,B53,B56,B68,B70,B72,B74,B88,B96,B97,B98,B99,C1,C13,C14,C15,C2,C20,C22,C39,C4,C40,C41,C44,C46,C49,C50,C51,C63,C64,C66,C67,C7,C76,C82,C83,C87,D2,D6,D7,D8 |
Chr8:26868091 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:26868405 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:26868595 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B124,B132,B28 |
Chr8:26868732 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C56 |
Chr8:26869013 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr8:26869040 |
C |
CG |
1bp_insertion | frameshift_variant | 115 | A10,A11,A13,A16,A18,A19,A21,A22,A23,A24,A3,A5,A7,B1,B100,B102,B103,B105,B106,B108,B109,B11,B114,B117,B118,B126,B13,B138,B139,B140,B18,B22,B25,B26,B29,B33,B35,B36,B4,B40,B44,B45,B46,B48,B49,B50,B52,B53,B54,B57,B58,B59,B61,B62,B63,B64,B65,B66,B68,B70,B71,B73,B75,B76,B77,B79,B8,B80,B86,B87,B88,B89,B90,B91,B92,B94,B95,B99,C15,C16,C19,C2,C22,C29,C3,C30,C31,C32,C33,C34,C36,C38,C4,C42,C45,C47,C48,C5,C50,C52,C55,C58,C60,C62,C63,C67,C68,C7,C8,C81,C9,D10,D11,D7,D8 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057778627.1PF00067
p450 46-489 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057778627.1 |
Pfam | PF00067 |
p450 | Domain | 46 | 489 | 3.7e-94 | 316.8 | Cytochrome P450 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。