当前解析结果
SmilChr08G002814| 统一新 Gene ID | SmilChr08G002814 |
|---|---|
| 名称 | SmilChr08G002814 |
| 描述 | uncharacterized SmilChr08G002814 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 27985766 - 27988926 / - |
| NCBI Gene ID | LOC130998272 |
|---|---|
| GeneID | 130998272 |
| locus_tag | - |
| NCBI Name | LOC130998272 |
| 原始查询 | SmilChr08G002814 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0225900; species=rice; confidence=low |
| 产物 | hit=Os08g0225900; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=20.8; qcov=0.775; evalue=5.18e-10; confidence=weak |
| Rice | Os08g0225900- identity=27.8; qcov=0.788; evalue=7.24e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998272 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057779686.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057779686.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057779686.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057779686.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057779686.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:27985804 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr8:27985824 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B130,B77,C19,D6 |
Chr8:27985840 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B130,B77,C19,D6 |
Chr8:27985841 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B130,B77,C19,D6 |
Chr8:27988068 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B65,C55 |
Chr8:27988138 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A8,B11,B99 |
Chr8:27988151 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B113,C60 |
Chr8:27988186 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A7,B38 |
Chr8:27988201 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A23,B108,C44 |
Chr8:27988214 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C54 |
Chr8:27988229 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
Chr8:27988232 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。