当前解析结果
SmilChr08G003411| 统一新 Gene ID | SmilChr08G003411 |
|---|---|
| 名称 | SmilChr08G003411 |
| 描述 | uncharacterized SmilChr08G003411 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 36125377 - 36128820 / - |
| NCBI Gene ID | LOC130997957 |
|---|---|
| GeneID | 130997957 |
| locus_tag | - |
| NCBI Name | LOC130997957 |
| 原始查询 | SmilChr08G003411 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nucleolin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818216]; symbol=TRM27; hit=AT2G36420; species=arabidopsis; confidence=medium |
| 产物 | nucleolin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818216]; symbol=TRM27; hit=AT2G36420; species=arabidopsis; confidence=medium |
| Arabidopsis | AT2G36420 (TRM27)nucleolin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818216] identity=36.8; qcov=1.1; evalue=1.49e-55; confidence=medium |
| Rice | Os03g0118100- identity=41.6; qcov=0.215; evalue=7.56e-06; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997957 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057779374.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057779374.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057779374.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057779374.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057779374.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:36125642 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr8:36125726 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:36125798 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B120,B139,C75 |
Chr8:36125810 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A6,C20 |
Chr8:36125871 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B27,B69,B73 |
Chr8:36125983 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C16,C23 |
Chr8:36126044 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr8:36126646 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr8:36127409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:36127440 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C14,C16,C23 |
Chr8:36127563 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr8:36127644 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B27,B69,B73 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。