当前解析结果
SmilChr08G003580| 统一新 Gene ID | SmilChr08G003580 |
|---|---|
| 名称 | SmilChr08G003580 |
| 描述 | uncharacterized SmilChr08G003580 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 38539760 - 38540585 / + |
| NCBI Gene ID | LOC130998453 |
|---|---|
| GeneID | 130998453 |
| locus_tag | - |
| NCBI Name | LOC130998453 |
| 原始查询 | SmilChr08G003580 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | WRKY DNA-binding protein 7 [Source:NCBI gene (formerly Entrezgene);Acc:828525]; symbol=WRKY7; hit=AT4G24240; species=arabidopsis; confidence=low |
| 产物 | WRKY DNA-binding protein 7 [Source:NCBI gene (formerly Entrezgene);Acc:828525]; symbol=WRKY7; hit=AT4G24240; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G24240 (WRKY7)WRKY DNA-binding protein 7 [Source:NCBI gene (formerly Entrezgene);Acc:828525] identity=28.9; qcov=0.821; evalue=2.64e-08; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998453 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057779852.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057779852.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057779852.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057779852.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057779852.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:38539822 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr8:38540089 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B133 |
Chr8:38540089 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr8:38540136 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B67,C49 |
Chr8:38540215 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B39,B48,D5 |
Chr8:38540223 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr8:38540241 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr8:38540290 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B100,B33 |
Chr8:38540295 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B138 |
Chr8:38540305 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C64 |
Chr8:38540333 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B11 |
Chr8:38540341 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。