当前解析结果
SmilChr08G004226| 统一新 Gene ID | SmilChr08G004226 |
|---|---|
| 名称 | SmilChr08G004226 |
| 描述 | golgin candidate 4-like |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 51659597 - 51666010 / + |
| NCBI Gene ID | LOC130998957 |
|---|---|
| GeneID | 130998957 |
| locus_tag | - |
| NCBI Name | LOC130998957 |
| 原始查询 | SmilChr08G004226 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | golgin candidate 4-like |
| 产物 | golgin candidate 4-like |
| Arabidopsis | AT2G46180 (GC4)golgin Putative 4 [Source:NCBI gene (formerly Entrezgene);Acc:819225] identity=53; qcov=1.02; evalue=0; confidence=high |
| Rice | Os08g0386900- identity=56.8; qcov=0.481; evalue=5.68e-124; confidence=medium |
| GO | GO:0005794 (Golgi apparatus); GO:0006888 (endoplasmic reticulum to Golgi vesicle-mediated transport); GO:0007030 (Golgi organization); GO:0031267 (small GTPase binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998957 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057780383.1 |
| 2 | Trans-golgi network | Trans-golgi network | 0.60000 | XP_057780383.1 |
| 3 | Golgi stack | 高尔基堆 | 0.20000 | XP_057780383.1 |
| 4 | Vesicle | 囊泡 | 0.20000 | XP_057780383.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057780383.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:51659851 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B19,B22 |
Chr8:51659928 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C49 |
Chr8:51661025 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B19,B22 |
Chr8:51662687 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C49 |
Chr8:51663637 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C76,D11,D8 |
Chr8:51663700 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr8:51664215 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B19,B22 |
Chr8:51664247 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B83 |
Chr8:51664359 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B101,B82,C1,C35 |
Chr8:51664941 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B107,C32,C68 |
Chr8:51665070 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A14,A5,B12,C27,C37 |
Chr8:51665071 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B19,B22 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。