当前解析结果
SmilChr08G004316| 统一新 Gene ID | SmilChr08G004316 |
|---|---|
| 名称 | SmilChr08G004316 |
| 描述 | UDP-glycosyltransferase 91C1-like |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 52850227 - 52851969 / - |
| NCBI Gene ID | LOC130999037 |
|---|---|
| GeneID | 130999037 |
| locus_tag | - |
| NCBI Name | LOC130999037 |
| 原始查询 | SmilChr08G004316 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | UDP-glycosyltransferase 91C1-like |
| 产物 | UDP-glycosyltransferase 91C1-like |
| Arabidopsis | AT5G49690 (AT5G49690)UDP-Glycosyltransferase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835032] identity=37.9; qcov=0.969; evalue=1.97e-110; confidence=medium |
| Rice | Os03g0804900- identity=36.5; qcov=1.01; evalue=6.49e-99; confidence=medium |
| GO | GO:0008194 (UDP-glycosyltransferase activity) |
| KEGG | - |
| Pfam | PF00201 (UDPGT); PF26168 (Glyco_transf_N) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999037 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057780489.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057780489.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057780489.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057780489.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057780489.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:52850682 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:52850937 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr8:52851150 |
AG |
A |
1bp_deletion | frameshift_variant | 6 | B130,B22,B51,B52,C73,D11 |
Chr8:52851201 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B47,C53,C84 |
Chr8:52851210 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | B130,B22,B51,B52,C73,D11 |
Chr8:52851457 |
C |
T |
EMS_canonical_SNV | stop_gained | 4 | A1,B131,B15,B60 |
Chr8:52851457 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A1,B131,B15,B60 |
Chr8:52851556 |
ATC |
A |
2bp_deletion | frameshift_variant | 1 | B100 |
Chr8:52851556 |
ATC |
A |
2bp_deletion | CDS_variant | 1 | B100 |
Chr8:52851649 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C87 |
Chr8:52851679 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
Chr8:52851847 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057780489.1PF26168
Glyco_transf_N 13-193 aa
PF00201
UDPGT 286-434 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057780489.1 |
Pfam | PF26168 |
Glyco_transf_N | Domain | 13 | 193 | 4.3e-10 | 40.6 | Glycosyltransferase, N-terminal domain |
XP_057780489.1 |
Pfam | PF00201 |
UDPGT | Family | 286 | 434 | 1.8e-11 | 44.3 | UDP-glucoronosyl and UDP-glucosyl transferase |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。