当前解析结果
SmilChr08G004391| 统一新 Gene ID | SmilChr08G004391 |
|---|---|
| 名称 | SmilChr08G004391 |
| 描述 | uncharacterized SmilChr08G004391 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 53667559 - 53668396 / + |
| NCBI Gene ID | LOC130999113 |
|---|---|
| GeneID | 130999113 |
| locus_tag | - |
| NCBI Name | LOC130999113 |
| 原始查询 | SmilChr08G004391 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819194]; symbol=AT2G45860; hit=AT2G45860; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819194]; symbol=AT2G45860; hit=AT2G45860; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G45860 (AT2G45860)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819194] identity=66.7; qcov=0.988; evalue=2.48e-13; confidence=low |
| Rice | Os02g0824400- identity=63.4; qcov=1; evalue=2.41e-11; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999113 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057780594.1 |
| 2 | Nucleolus | 核仁 | 1.00000 | XP_057780594.1 |
| 3 | Nucleolus rim | Nucleolus rim | 0.20000 | XP_057780594.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057780594.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057780594.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:53668215 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A9,B112,B91,C35,C51 |
Chr8:53668224 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A9,B112,B91,C35,C51 |
Chr8:53668230 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A9,B112,B91,C35,C51 |
Chr8:53668235 |
GC |
G |
1bp_deletion | frameshift_variant | 5 | A9,B112,B91,C35,C51 |
Chr8:53668235 |
GC |
G |
1bp_deletion | CDS_variant | 5 | A9,B112,B91,C35,C51 |
Chr8:53668250 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A9,B112,C35,C51 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。