当前解析结果
SmilChr08G004435| 统一新 Gene ID | SmilChr08G004435 |
|---|---|
| 名称 | SmilChr08G004435 |
| 描述 | BON1-associated protein 2-like |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 54034652 - 54036137 / + |
| NCBI Gene ID | LOC130999150 |
|---|---|
| GeneID | 130999150 |
| locus_tag | - |
| NCBI Name | LOC130999150 |
| 原始查询 | SmilChr08G004435 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | BON1-associated protein 2-like |
| 产物 | BON1-associated protein 2-like |
| Arabidopsis | AT2G45760 (BAP2)BON association protein 2 [Source:NCBI gene (formerly Entrezgene);Acc:819184] identity=38.5; qcov=0.844; evalue=5.38e-16; confidence=low |
| Rice | Os09g0526500- identity=34.3; qcov=0.89; evalue=1.51e-10; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999150 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057780637.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057780637.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057780637.1 |
| 4 | Cell membrane | 细胞膜 | 0.20000 | XP_057780637.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057780637.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:54035554 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A15,B24,B60,C14 |
Chr8:54035641 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B126,C19,C47 |
Chr8:54035663 |
AAC |
A |
2bp_deletion | frameshift_variant | 14 | B130,B21,B28,B48,B59,B64,B75,B83,C20,C28,C29,C54,C70,C72 |
Chr8:54035665 |
CT |
C |
1bp_deletion | frameshift_variant | 58 | A11,A22,A23,A25,A4,B1,B10,B100,B113,B12,B123,B126,B129,B13,B134,B135,B137,B139,B14,B15,B19,B25,B31,B34,B36,B37,B45,B5,B51,B54,B6,B63,B65,B71,B72,B76,B87,B94,B97,B99,C12,C14,C18,C19,C24,C27,C35,C37,C38,C40,C43,C45,C47,C59,C62,C7,C79,C9 |
Chr8:54035708 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B20,B72,B85 |
Chr8:54035737 |
G |
GC |
1bp_insertion | frameshift_variant | 6 | A8,B106,B109,B29,C34,C72 |
Chr8:54035744 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A3,B108,B36,D11,D4 |
Chr8:54035746 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A16,B114,B90,B92,C15 |
Chr8:54035905 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,B114,B90,B92,C15 |
Chr8:54035933 |
C |
CCG |
2bp_insertion | frameshift_variant | 58 | A14,A6,A8,B102,B105,B11,B111,B118,B120,B125,B128,B134,B137,B138,B17,B18,B22,B27,B40,B44,B49,B52,B53,B58,B59,B60,B62,B67,B68,B84,B86,B89,B93,C10,C11,C21,C24,C25,C26,C29,C33,C34,C36,C37,C39,C43,C54,C56,C57,C61,C65,C69,C71,C75,C79,C8,D1,D7 |
Chr8:54035989 |
CG |
C |
1bp_deletion | frameshift_variant | 135 | A13,A18,A2,A20,A21,A23,A25,A3,A4,A6,A7,A9,B1,B10,B101,B104,B107,B108,B109,B111,B112,B113,B114,B115,B117,B119,B12,B122,B123,B124,B125,B126,B13,B131,B133,B135,B136,B14,B140,B15,B16,B20,B21,B26,B3,B31,B33,B35,B36,B37,B4,B41,B44,B45,B46,B47,B48,B50,B51,B56,B57,B6,B61,B62,B65,B68,B70,B71,B72,B73,B77,B78,B79,B81,B83,B84,B85,B88,B9,B91,B93,B94,B96,B98,C1,C12,C13,C15,C17,C18,C19,C2,C21,C22,C23,C26,C31,C35,C36,C37,C38,C39,C4,C40,C41,C42,C45,C46,C49,C50,C52,C53,C56,C6,C60,C62,C64,C66,C73,C74,C76,C80,C82,C83,C85,C87,C9,D10,D11,D2,D4,D5,D6,D8,D9 |
Chr8:54035999 |
AT |
A |
1bp_deletion | frameshift_variant | 23 | A15,B127,B132,B24,B33,B41,B47,B53,B55,B61,B64,B66,B82,B99,C10,C14,C32,C42,C47,C52,C68,C86,C87 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。