当前解析结果
SmilChr08G004542| 统一新 Gene ID | SmilChr08G004542 |
|---|---|
| 名称 | SmilChr08G004542 |
| 描述 | pentatricopeptide repeat-containing protein At1g62720-like |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 55027990 - 55030436 / + |
| NCBI Gene ID | LOC130999254 |
|---|---|
| GeneID | 130999254 |
| locus_tag | - |
| NCBI Name | LOC130999254 |
| 原始查询 | SmilChr08G004542 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | pentatricopeptide repeat-containing protein At1g62720-like |
| 产物 | pentatricopeptide repeat-containing protein At1g62720-like |
| Arabidopsis | AT1G12775 (AT1G12775)Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:3766712] identity=30.6; qcov=1.17; evalue=5.72e-92; confidence=low |
| Rice | Os06g0152500- identity=33.5; qcov=0.77; evalue=8.47e-69; confidence=low |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | PF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999254 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057780746.1 |
| 2 | Chloroplast | 叶绿体 | 0.20000 | XP_057780746.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057780746.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057780746.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057780746.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:55028151 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,B88 |
Chr8:55028256 |
T |
TC |
1bp_insertion | frameshift_variant | 16 | A5,A6,B104,B124,B140,B16,B17,B31,B6,B88,B97,C17,C24,C25,C46,C52 |
Chr8:55028286 |
A |
AC |
1bp_insertion | frameshift_variant | 26 | B102,B125,B138,B5,B56,B59,B6,B64,B69,B75,B78,B79,B90,B96,C10,C2,C20,C21,C29,C42,C44,C50,C59,C63,C64,C66 |
Chr8:55028301 |
T |
TCA |
2bp_insertion | frameshift_variant | 20 | B102,B125,B126,B138,B59,B6,B64,B65,B75,C10,C21,C29,C44,C50,C59,C61,C63,C64,C66,D9 |
Chr8:55028303 |
AAT |
A |
2bp_deletion | frameshift_variant | 19 | B102,B125,B138,B59,B6,B64,B65,B75,C10,C21,C29,C44,C50,C59,C61,C63,C64,C66,D9 |
Chr8:55028318 |
TGA |
T |
2bp_deletion | frameshift_variant | 19 | B102,B125,B138,B59,B6,B64,B65,B75,C10,C21,C29,C44,C50,C59,C61,C63,C64,C66,D9 |
Chr8:55028433 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr8:55028434 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B118,B99,C13 |
Chr8:55028457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B99,D11 |
Chr8:55028520 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A19,D4 |
Chr8:55028583 |
G |
GTT |
2bp_insertion | frameshift_variant | 11 | A4,B12,B123,B29,B42,B56,C10,C23,C41,C48,C81 |
Chr8:55028591 |
TGA |
T |
2bp_deletion | frameshift_variant | 2 | C61,C74 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057780746.1PF13041
PPR_2 76-122 aa
PF01535
PPR 78-107 aa
PF13041
PPR_2 187-229 aa
PF23276
TPR_24 197-254 aa
PF17177
PPR_long 200-305 aa
PF13812
PPR_3 209-260 aa
PF12854
PPR_1 212-243 aa
PF13041
PPR_2 216-263 aa
PF01535
PPR 219-247 aa
PF12854
PPR_1 247-279 aa
PF01535
PPR 253-283 aa
PF13041
PPR_2 257-299 aa
PF13812
PPR_3 273-331 aa
PF12854
PPR_1 281-310 aa
PF13041
PPR_2 285-333 aa
PF01535
PPR 288-318 aa
PF13812
PPR_3 310-365 aa
PF12854
PPR_1 316-349 aa
PF13041
PPR_2 321-368 aa
PF01535
PPR 324-350 aa
PF12854
PPR_1 353-382 aa
PF01535
PPR 359-388 aa
PF13041
PPR_2 363-404 aa
PF13812
PPR_3 378-435 aa
PF12854
PPR_1 386-417 aa
PF13041
PPR_2 390-439 aa
PF01535
PPR 393-423 aa
PF23276
TPR_24 404-496 aa
PF13812
PPR_3 414-470 aa
PF12854
PPR_1 421-454 aa
PF13041
PPR_2 425-473 aa
PF01535
PPR 429-458 aa
PF13812
PPR_3 448-493 aa
PF12854
PPR_1 456-489 aa
PF13041
PPR_2 460-502 aa
PF01535
PPR 463-493 aa
XP_057780747.1PF13041
PPR_2 76-122 aa
PF01535
PPR 78-107 aa
PF13041
PPR_2 187-229 aa
PF23276
TPR_24 197-254 aa
PF17177
PPR_long 200-305 aa
PF13812
PPR_3 209-260 aa
PF12854
PPR_1 212-243 aa
PF13041
PPR_2 216-263 aa
PF01535
PPR 219-247 aa
PF12854
PPR_1 247-279 aa
PF01535
PPR 253-283 aa
PF13041
PPR_2 257-299 aa
PF13812
PPR_3 273-331 aa
PF12854
PPR_1 281-310 aa
PF13041
PPR_2 285-333 aa
PF01535
PPR 288-318 aa
PF13812
PPR_3 310-365 aa
PF12854
PPR_1 316-349 aa
PF13041
PPR_2 321-368 aa
PF01535
PPR 324-350 aa
PF12854
PPR_1 353-382 aa
PF01535
PPR 359-388 aa
PF13041
PPR_2 363-404 aa
PF13812
PPR_3 378-435 aa
PF12854
PPR_1 386-417 aa
PF13041
PPR_2 390-439 aa
PF01535
PPR 393-423 aa
PF23276
TPR_24 404-496 aa
PF13812
PPR_3 414-470 aa
PF12854
PPR_1 421-454 aa
PF13041
PPR_2 425-473 aa
PF01535
PPR 429-458 aa
PF13812
PPR_3 448-493 aa
PF12854
PPR_1 456-489 aa
PF13041
PPR_2 460-502 aa
PF01535
PPR 463-493 aa
XP_057780748.1PF13041
PPR_2 76-122 aa
PF01535
PPR 78-107 aa
PF13041
PPR_2 187-229 aa
PF23276
TPR_24 197-254 aa
PF17177
PPR_long 200-305 aa
PF13812
PPR_3 209-260 aa
PF12854
PPR_1 212-243 aa
PF13041
PPR_2 216-263 aa
PF01535
PPR 219-247 aa
PF12854
PPR_1 247-279 aa
PF01535
PPR 253-283 aa
PF13041
PPR_2 257-299 aa
PF13812
PPR_3 273-331 aa
PF12854
PPR_1 281-310 aa
PF13041
PPR_2 285-333 aa
PF01535
PPR 288-318 aa
PF13812
PPR_3 310-365 aa
PF12854
PPR_1 316-349 aa
PF13041
PPR_2 321-368 aa
PF01535
PPR 324-350 aa
PF12854
PPR_1 353-382 aa
PF01535
PPR 359-388 aa
PF13041
PPR_2 363-404 aa
PF13812
PPR_3 378-435 aa
PF12854
PPR_1 386-417 aa
PF13041
PPR_2 390-439 aa
PF01535
PPR 393-423 aa
PF23276
TPR_24 404-496 aa
PF13812
PPR_3 414-470 aa
PF12854
PPR_1 421-454 aa
PF13041
PPR_2 425-473 aa
PF01535
PPR 429-458 aa
PF13812
PPR_3 448-493 aa
PF12854
PPR_1 456-489 aa
PF13041
PPR_2 460-502 aa
PF01535
PPR 463-493 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 76 | 122 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 78 | 107 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 187 | 229 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 197 | 254 | 2.6e-26 | 92.8 | Pentatricopeptide repeat-containing protein |
XP_057780746.1 |
Pfam | PF17177 |
PPR_long | Repeat | 200 | 305 | 6.4e-21 | 75.4 | Pentacotripeptide-repeat region of PRORP |
XP_057780746.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 209 | 260 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 212 | 243 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 216 | 263 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 219 | 247 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 247 | 279 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 253 | 283 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 257 | 299 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 273 | 331 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 281 | 310 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 285 | 333 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 288 | 318 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 310 | 365 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 316 | 349 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 321 | 368 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 324 | 350 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 353 | 382 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 359 | 388 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 363 | 404 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 378 | 435 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 386 | 417 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 390 | 439 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 393 | 423 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 404 | 496 | 2.6e-26 | 92.8 | Pentatricopeptide repeat-containing protein |
XP_057780746.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 414 | 470 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 421 | 454 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 425 | 473 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 429 | 458 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780746.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 448 | 493 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780746.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 456 | 489 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780746.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 460 | 502 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780746.1 |
Pfam | PF01535 |
PPR | Repeat | 463 | 493 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 76 | 122 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 78 | 107 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 187 | 229 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 197 | 254 | 2.6e-26 | 92.8 | Pentatricopeptide repeat-containing protein |
XP_057780747.1 |
Pfam | PF17177 |
PPR_long | Repeat | 200 | 305 | 6.4e-21 | 75.4 | Pentacotripeptide-repeat region of PRORP |
XP_057780747.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 209 | 260 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 212 | 243 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 216 | 263 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 219 | 247 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 247 | 279 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 253 | 283 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 257 | 299 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 273 | 331 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 281 | 310 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 285 | 333 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 288 | 318 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 310 | 365 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 316 | 349 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 321 | 368 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 324 | 350 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 353 | 382 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 359 | 388 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 363 | 404 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 378 | 435 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 386 | 417 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 390 | 439 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 393 | 423 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 404 | 496 | 2.6e-26 | 92.8 | Pentatricopeptide repeat-containing protein |
XP_057780747.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 414 | 470 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 421 | 454 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 425 | 473 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 429 | 458 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780747.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 448 | 493 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780747.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 456 | 489 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780747.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 460 | 502 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780747.1 |
Pfam | PF01535 |
PPR | Repeat | 463 | 493 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 76 | 122 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 78 | 107 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 187 | 229 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 197 | 254 | 2.6e-26 | 92.8 | Pentatricopeptide repeat-containing protein |
XP_057780748.1 |
Pfam | PF17177 |
PPR_long | Repeat | 200 | 305 | 6.4e-21 | 75.4 | Pentacotripeptide-repeat region of PRORP |
XP_057780748.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 209 | 260 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 212 | 243 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 216 | 263 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 219 | 247 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 247 | 279 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 253 | 283 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 257 | 299 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 273 | 331 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 281 | 310 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 285 | 333 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 288 | 318 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 310 | 365 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 316 | 349 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 321 | 368 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 324 | 350 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 353 | 382 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 359 | 388 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 363 | 404 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 378 | 435 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 386 | 417 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 390 | 439 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 393 | 423 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 404 | 496 | 2.6e-26 | 92.8 | Pentatricopeptide repeat-containing protein |
XP_057780748.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 414 | 470 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 421 | 454 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 425 | 473 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 429 | 458 | 1.6e-72 | 235.6 | PPR repeat |
XP_057780748.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 448 | 493 | 2.9e-51 | 172.1 | Pentatricopeptide repeat domain |
XP_057780748.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 456 | 489 | 3.7e-99 | 324.8 | PPR repeat |
XP_057780748.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 460 | 502 | 1.1e-122 | 400.7 | PPR repeat family |
XP_057780748.1 |
Pfam | PF01535 |
PPR | Repeat | 463 | 493 | 1.6e-72 | 235.6 | PPR repeat |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。