Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G004583`

染色体: Chr08 坐标: 55408563-55412101 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G004583`
名称	SmilChr08G004583
描述	putative late blight resistance protein homolog R1A-10
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	55408563 - 55412101 / `+`

ID 对照

NCBI Gene ID	`LOC130999285`
GeneID	`130999285`
locus_tag	`-`
NCBI Name	`LOC130999285`
原始查询	`SmilChr08G004583`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	putative late blight resistance protein homolog R1A-10
产物	putative late blight resistance protein homolog R1A-10
Arabidopsis	`AT1G53350` (AT1G53350) Disease resistance protein (CC-NBS-LRR class) family [Source:NCBI gene (formerly Entrezgene);Acc:841771] identity=34.6; qcov=0.824; evalue=3.18e-60; confidence=low
Rice	`Os04g0118800` - identity=36.4; qcov=0.826; evalue=1.82e-67; confidence=medium
GO	GO:0043531 (ADP binding); GO:0098542 (defense response to other organism)
KEGG	-
Pfam	PF00931 (NB-ARC); PF23559 (WHD_DRP)
InterPro	-
eggNOG	-
NR	GeneID:130999285

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057780780.1`
2	Cytosol	细胞质基质	0.20000	`XP_057780777.1`
3	Endoplasmic reticulum	内质网	0.20000	`XP_057780779.1`
4	Nucleus	细胞核	0.00000	`XP_057780780.1`
5	Chromosome	染色体	0.00000	`XP_057780780.1`

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057780777.1

545 aa

272

545

NB-ARC

WHD_DRP

PF00931 NB-ARC 141-311 aa PF23559 WHD_DRP 395-465 aa

XP_057780778.1

545 aa

272

545

NB-ARC

WHD_DRP

PF00931 NB-ARC 141-311 aa PF23559 WHD_DRP 395-465 aa

XP_057780779.1

511 aa

256

511

NB-ARC

WHD_DRP

PF00931 NB-ARC 176-277 aa PF23559 WHD_DRP 361-431 aa

XP_057780780.1

449 aa

224

449

NB-ARC

WHD_DRP

PF00931 NB-ARC 45-215 aa PF23559 WHD_DRP 299-369 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057780777.1`	Pfam	`PF00931`	NB-ARC	Domain	141	311	4.6e-43	147.5	NB-ARC domain
`XP_057780777.1`	Pfam	`PF23559`	WHD_DRP	Domain	395	465	2.4e-16	60.2	Disease resistance protein Winged helix domain
`XP_057780778.1`	Pfam	`PF00931`	NB-ARC	Domain	141	311	4.6e-43	147.5	NB-ARC domain
`XP_057780778.1`	Pfam	`PF23559`	WHD_DRP	Domain	395	465	2.4e-16	60.2	Disease resistance protein Winged helix domain
`XP_057780779.1`	Pfam	`PF00931`	NB-ARC	Domain	176	277	2.1e-24	86.7	NB-ARC domain
`XP_057780779.1`	Pfam	`PF23559`	WHD_DRP	Domain	361	431	2.3e-16	60.3	Disease resistance protein Winged helix domain
`XP_057780780.1`	Pfam	`PF00931`	NB-ARC	Domain	45	215	3.8e-43	147.8	NB-ARC domain
`XP_057780780.1`	Pfam	`PF23559`	WHD_DRP	Domain	299	369	1.8e-16	60.7	Disease resistance protein Winged helix domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057924796.1
CTGAGATTTTGGGATGCATACAGCTCTCATTTCCCAGTTTTGAAGAAGCTTAGGCTTATGGGATTGAAACACTTGGAAGAGATCCCTTTGGATATTGGAGAAATTCCGACACTTGAAGTTATCAGTGTGGATGGATGCAGTGAGTCTGTTGAAATTTCGGCAATGAGAATAAAGGAAGAACAAGAGAGTGTAGGACATGAATTAAGAGGAGCCTTCATTAGATTATCTCTAAATAAAATTATCAATTTGGTTTTAAAATT...

XM_057924795.1
CTGAGATTTTGGGATGCATACAGCTCTCATTTCCCAGTTTTGAAGAAGCTTAGGCTTATGGGATTGAAACACTTGGAAGAGATCCCTTTGGATATTGGAGAAATTCCGACACTTGAAGTTATCAGTGTGGATGGATGCAGTGAGTCTGTTGAAATTTCGGCAATGAGAATAAAGGAAGAACAAGAGAGTGTAGGACATGAATTAAGAGGAGCCTTCATTAGATTATCTCTAAATAAAATTATCAATTTGGTTTTAAAATT...

CDS

4 records

下载 CDS FASTA

LOC130999285
ATGGCTGCAGCTTATGCAGCTCTAGTTTCTCTGATGAATACAGTGGAGCAGATCCAAAACCACCCTCAACTTTCCACTTCTCTTGATCATTTCCAGATTGAGATCCTCCGCGAAAAGGTTTATTTCTTCCTAGATTTTATAGAAAGTTATTCCTCTCATGTAGATGATTTGGAGAGGTGGATTGCAACTGCAGCTCATGCGGCTGAAGATTTATTTGAATCCCATGTTGTTTGGCGAATTCGTACCCACGAAAAAAACAG...

Protein

4 records

下载 Protein FASTA

XP_057780777.1
MAAAYAALVSLMNTVEQIQNHPQLSTSLDHFQIEILREKVYFFLDFIESYSSHVDDLERWIATAAHAAEDLFESHVVWRIRTHEKNSLDLQKVIVDMDLVREKVLKVKEERGVRYEQPTANSSRSVASNREAIMVGFGGYLDQLLDLLTGNQSSRQIISIVGMGGTGKTTLAKNTFENSIIKRHFDVRVWVSVSNDYNLSDIFLEALSHLKELTGTIEMDNERDEYRLGEQLYKGLTGRRYLIVLDDVWSVEVWDKIRFY...

XP_057780778.1
MAAAYAALVSLMNTVEQIQNHPQLSTSLDHFQIEILREKVYFFLDFIESYSSHVDDLERWIATAAHAAEDLFESHVVWRIRTHEKNSLDLQKVIVDMDLVREKVLKVKEERGVRYEQPTANSSRSVASNREAIMVGFGGYLDQLLDLLTGNQSSRQIISIVGMGGTGKTTLAKNTFENSIIKRHFDVRVWVSVSNDYNLSDIFLEALSHLKELTGTIEMDNERDEYRLGEQLYKGLTGRRYLIVLDDVWSVEVWDKIRFY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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