当前解析结果
SmilChr08G004765| 统一新 Gene ID | SmilChr08G004765 |
|---|---|
| 名称 | SmilChr08G004765 |
| 描述 | uncharacterized SmilChr08G004765 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 57005684 - 57006588 / - |
| NCBI Gene ID | LOC130999435 |
|---|---|
| GeneID | 130999435 |
| locus_tag | - |
| NCBI Name | LOC130999435 |
| 原始查询 | SmilChr08G004765 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | 2Fe-2S ferredoxin-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819936]; symbol=AT3G07480; hit=AT3G07480; species=arabidopsis; confidence=high |
| 产物 | 2Fe-2S ferredoxin-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819936]; symbol=AT3G07480; hit=AT3G07480; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G07480 (AT3G07480)2Fe-2S ferredoxin-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819936] identity=70.6; qcov=0.994; evalue=1.41e-79; confidence=high |
| Rice | Os09g0514600- identity=67.7; qcov=1; evalue=2.15e-71; confidence=high |
| GO | GO:0005739 (mitochondrion); GO:0051537 (2 iron, 2 sulfur cluster binding); GO:0140647 (P450-containing electron transport chain) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999435 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057780944.1 |
| 2 | Mitochondrion matrix | 线粒体基质 | 0.60000 | XP_057780944.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057780944.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057780944.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057780944.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:57005964 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B68 |
Chr8:57005973 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B68 |
Chr8:57006084 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr8:57006090 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B101,B13,B41,B78,C85 |
Chr8:57006130 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B117 |
Chr8:57006236 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B68 |
Chr8:57006327 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C26 |
Chr8:57006345 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr8:57006379 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B123,B14,B50,C8 |
Chr8:57006401 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | A11 |
Chr8:57006401 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。