Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G004841`

染色体: Chr08 坐标: 57680703-57685634 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G004841`
名称	SmilChr08G004841
描述	serine/threonine-protein kinase MHK
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	57680703 - 57685634 / `+`

ID 对照

NCBI Gene ID	`LOC130999503`
GeneID	`130999503`
locus_tag	`-`
NCBI Name	`LOC130999503`
原始查询	`SmilChr08G004841`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	serine/threonine-protein kinase MHK
产物	serine/threonine-protein kinase MHK
Arabidopsis	`AT4G13020` (MHK) Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:826915] identity=59.5; qcov=0.967; evalue=6.37e-142; confidence=high
Rice	`Os03g0847600` (CDKF) - identity=51.2; qcov=0.926; evalue=4.16e-115; confidence=high
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0005737 (cytoplasm); GO:0006468 (protein phosphorylation); GO:0035556 (intracellular signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130999503

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057781023.1`
2	Cytoplasm	细胞质	1.00000	`XP_057781023.1`
3	Cytosol	细胞质基质	1.00000	`XP_057781023.1`
4	Nucleoplasm	核质	0.40000	`XP_057781023.1`
5	Chromosome	染色体	0.00000	`XP_057781025.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:57682576`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr8:57682609`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B103,B140,B6,C29
`Chr8:57682788`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A4,B120,B91,B93,C78
`Chr8:57682870`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C76,D8
`Chr8:57683076`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B108,B56,B96,C14
`Chr8:57683104`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B77
`Chr8:57683208`	`C`	`T`	EMS_canonical_SNV	stop_gained	46	A11,A18,A20,A24,A7,B1,B111,B129,B14,B2,B22,B27,B28,B3,B45,B47,B50,B58,B62,B63,B66,B70,B72,B79,B84,B85,B92,B94,C10,C19,C2,C21,C29,C31,C32,C48,C56,C60,C61,C68,C75,C77,C81,C82,C83,D7
`Chr8:57683898`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr8:57684097`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A24,B40,C60,C62
`Chr8:57684251`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C34,C5,D5
`Chr8:57684266`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B99,C87
`Chr8:57684847`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D1

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057781023.1

430 aa

215

430

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 4-283 aa PF07714 PK_Tyr_Ser-Thr 6-195 aa

XP_057781024.1

430 aa

215

430

Pkinase

PK_Tyr_Ser-Thr

PF00069 Pkinase 4-283 aa PF07714 PK_Tyr_Ser-Thr 6-195 aa

XP_057781025.1

365 aa

182

365

PK_Tyr_Ser-Thr

Pkinase

PF07714 PK_Tyr_Ser-Thr 18-130 aa PF00069 Pkinase 18-218 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057781023.1`	Pfam	`PF00069`	Pkinase	Domain	4	283	3.4e-72	243.7	Protein kinase domain
`XP_057781023.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	6	195	1e-36	127.3	Protein tyrosine and serine/threonine kinase
`XP_057781024.1`	Pfam	`PF00069`	Pkinase	Domain	4	283	3.4e-72	243.7	Protein kinase domain
`XP_057781024.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	6	195	1e-36	127.3	Protein tyrosine and serine/threonine kinase
`XP_057781025.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	18	130	4e-19	69.7	Protein tyrosine and serine/threonine kinase
`XP_057781025.1`	Pfam	`PF00069`	Pkinase	Domain	18	218	3e-48	165.2	Protein kinase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057925040.1
TATATTTTAAATATTTTCAATTTTTTAATTTCATTTCTAAATATATTATTCGCCTTCGGTTTCTTCTCCAACGCTTCTTCTACGGATTTTGCTGTTACGATTTCCATACTCTCTCTCTCTTGTTATCAACGATTCCTGTCGTATTGCATTCTCTCTTTCAATACGCACCGGATTTTATTCTATAGATATTTCTTCGTTTCTACTTATGGCATGTTGCTGTTCTATATGAGGTCAGCTCATCAAGATGGATGGAATTTGAC...

XM_057925041.1
TTTCATTTCTAAATATATTATTCGCCTTCGGTTTCTTCTCCAACGCTTCTTCTACGGATTTTGCTGTTACGATTTCCATACTCTCTCTCTCTTGTTATCAACGATTCCTGTCGTATTGCATTCTCTCTTTCAATACGCACCGGATTTTATTCTATAGATATTTCTTCGTTTCTACTTATGGCATGTTGCTGTTCTATATGAGGTCAGCTCATCAAGGTAGAATTTTGAATTTTGTGGAGCTTTATTGATATGCTGAAGAG...

CDS

3 records

下载 CDS FASTA

LOC130999503
ATGGAAAGATATAAAATTTTGGCAGAGCTTGGTGATGGAACTTCTGGAATTGTATATAAAGCAATATATATGGAAACATCTGAGATTGTCGCAGTCAAGAAAATGAAGAGAAAGTTCAATTACTGGGAAGAATGTGTAAATCTACGGGAAGTTAAGTCTCTGCGGAAATTAAACCATCCTAATATTATCAAGTTGTTGGAGATTGTCCAAGAAAACAATGAGCTTTTCTTCATATTTGAGTATATGGAACACAACTTATA...

Protein

3 records

下载 Protein FASTA

XP_057781023.1
MERYKILAELGDGTSGIVYKAIYMETSEIVAVKKMKRKFNYWEECVNLREVKSLRKLNHPNIIKLLEIVQENNELFFIFEYMEHNLYEIMKDQREPVQEDEIRGLMSQLLKGLAHVHGHGYLHRDLKPENLLVTNNIIKIADFGLARELSSTPPFTDYVSTRWYRAPEVLLQSSTYTPAIDMWAVGAILAELFTLHPIFPGESEIDQLYKICCVLGAPDWRTFPQATNISRLVDITYSEVMPTDLSDIIPNASLEAIDLI...

XP_057781024.1
MERYKILAELGDGTSGIVYKAIYMETSEIVAVKKMKRKFNYWEECVNLREVKSLRKLNHPNIIKLLEIVQENNELFFIFEYMEHNLYEIMKDQREPVQEDEIRGLMSQLLKGLAHVHGHGYLHRDLKPENLLVTNNIIKIADFGLARELSSTPPFTDYVSTRWYRAPEVLLQSSTYTPAIDMWAVGAILAELFTLHPIFPGESEIDQLYKICCVLGAPDWRTFPQATNISRLVDITYSEVMPTDLSDIIPNASLEAIDLI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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