Red Sage Omics · 拟南芥/水稻候选同源 · 基因邻域

同源 / 共线性检索

输入丹参 Gene ID、拟南芥/水稻 Gene ID、symbol 或功能关键词，查询丹参候选同源基因及拟南芥/水稻功能线索。当前先展示 BLASTP 同源证据和基因邻域；严格 MCScan 共线性锚定块可在导入 anchors 文件后升级展示。

基因邻域 / 共线性上下文

丹参参考基因组

SmilChr01G000001 SmilChr01G000002 SmilChr01G000003 SmilChr01G000004 SmilChr01G000005 SmilChr01G000006 SmilChr01G000007 SmilChr01G000008 SmilChr01G000009 SmilChr01G000010 SmilChr01G000011

拟南芥 TAIR10

AT1G78815 / LSH7 AT1G78820 / AT1G78820 AT1G78830 / AT1G78830 AT1G78840 / AT1G78840 AT1G78850 / AT1G78850 AT1G78860 / AT1G78860 AT1G78870 / UBC35 AT1G78880 / AT1G78880 AT1G78890 / AT1G78890 AT1G78895 / AT1G78895 AT1G78900 / VHA-A

水稻 IRGSP-1.0

Os02g0749450 Os02g0749500 Os02g0749700 / OsLAC10 Os02g0749800 Os02g0749900 Os02g0750100 Os02g0750400 Os02g0750500 Os02g0750600 / MUB3 Os02g0750701 Os02g0750800 / P0431B06.19

同源候选表

丹参 Gene	蛋白	最佳物种	最佳命中	序列一致性	查询序列覆盖率	E-value	置信度	拟南芥	水稻	功能描述
SmilChr01G000001	SmilChr01G000001.3	arabidopsis	AT1G79220 (AT1G79220)	47.89	0.98	1.28e-110	high	AT1G79220 (AT1G79220) Mitochondrial transcription termination factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:844263]	Os02g0749800 None	Mitochondrial transcription termination factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:844263]
SmilChr01G000001	SmilChr01G000001.2	arabidopsis	AT1G79220 (AT1G79220)	47.32	0.92	1.89e-110	high	AT1G79220 (AT1G79220) Mitochondrial transcription termination factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:844263]	Os02g0749800 None	Mitochondrial transcription termination factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:844263]
SmilChr01G000001	SmilChr01G000001.1	arabidopsis	AT1G79220 (AT1G79220)	47.89	0.81	7.53e-110	high	AT1G79220 (AT1G79220) Mitochondrial transcription termination factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:844263]	Os02g0749800 None	Mitochondrial transcription termination factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:844263]