同时被本地 STRING-like 预测和 Salvia splendens 官方 STRING 同源转移支持。
官方 STRING 层来自 Salvia splendens,不是丹参本物种 STRING 直接证据;同源转移使用丹参蛋白与 STRING 蛋白的 BLASTP 最佳匹配。
本地 STRING-like 分数是序列、结构域、定位和长度特征的启发式候选排序,尚未以丹参原生金标准互作集完成独立基准评估。因此仅应将其作为探索性筛选;默认“双证据支持”不等同于实验验证。
物种: Salvia miltiorrhiza
本地候选记录: 416557
官方同源转移边: 851880
双证据边: 10369
查询基因: SmilChr05G001096
当前证据层: 双证据支持
| 排序 | 候选基因 | 来源蛋白 ID(STRING 转移或本地) | 丹参位点蛋白 ID | 证据层 | 本地分数 | 官方 STRING 分数 | 来源 | 证据 |
|---|---|---|---|---|---|---|---|---|
| 1 |
SmilChr02G000714
|
180675.A0A4D8XWJ0 | SmilChr02G000714.1 |
双证据支持 | 80.99 | 999 | Salvia splendens STRING v12.0 | experiments_transferred:109; database_transferred:999; coexpression_transferred:168; textmining_transferred:458; neighborhood_transferred:132; cooccurence:52; homology:977 |
| 2 |
SmilChr01G004359
|
180675.A0A4D9AEW7 | SmilChr01G004359.1 |
双证据支持 | 36.64 | 961 | Salvia splendens STRING v12.0 | experiments_transferred:348; database_transferred:873; coexpression_transferred:53; textmining_transferred:500; neighborhood_transferred:180 |
| 3 |
SmilChr02G004233
|
180675.A0A4D8ZDC3 | SmilChr02G004233.1 |
双证据支持 | 40.68 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 4 |
SmilChr08G004495
|
180675.A0A4D8ZFE5 | SmilChr08G004495.1 |
双证据支持 | 40.08 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 5 |
SmilChr04G003505
|
180675.A0A4D9BSJ2 | SmilChr04G003505.1;SmilChr04G003505.2;SmilChr04G003505.3;SmilChr04G003505.4 |
双证据支持 | 39.40 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 6 |
SmilChr06G000919
|
180675.A0A4D8Y9K3 | SmilChr06G000919.1 |
双证据支持 | 38.80 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 7 |
SmilChr01G003283
|
180675.A0A4D8Z4H4 | SmilChr01G003283.1 |
双证据支持 | 38.28 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 8 |
SmilChr01G005423
|
180675.A0A4D8Z5C0 | SmilChr01G005423.1 |
双证据支持 | 37.69 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 9 |
SmilChr01G004222
|
180675.A0A4D8ZH64 | SmilChr01G004222.1;SmilChr01G004222.2 |
双证据支持 | 37.48 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 10 |
SmilChr03G000052
|
180675.A0A4D8YJL9 | SmilChr03G000052.1 |
双证据支持 | 37.27 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 11 |
SmilChr01G005458
|
180675.A0A4D8Z4X9 | SmilChr01G005458.1 |
双证据支持 | 36.94 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 12 |
SmilChr04G000554
|
180675.A0A4D9AM46 | SmilChr04G000554.1 |
双证据支持 | 33.69 | 910 | Salvia splendens STRING v12.0 | experiments_transferred:108; database_transferred:863; coexpression_transferred:53; textmining_transferred:315; neighborhood_transferred:41 |
| 13 |
SmilChr02G001660
|
180675.A0A4D8ZM08 | SmilChr02G001660.1 |
双证据支持 | 35.05 | 875 | Salvia splendens STRING v12.0 | experiments_transferred:87; database_transferred:863; textmining_transferred:88; neighborhood_transferred:41 |
| 14 |
SmilChr02G001671
|
180675.A0A4D9BFL4 | SmilChr02G001671.1 |
双证据支持 | 33.67 | 875 | Salvia splendens STRING v12.0 | experiments_transferred:87; database_transferred:863; textmining_transferred:88; neighborhood_transferred:41 |
可输入两段 CDS 或蛋白序列。标题仅作查找线索;提交序列须与站内参考蛋白完全一致,未提供可靠位点信息的跨位点相同序列不作唯一身份认定。若可确认匹配,系统会优先整合 Salvia splendens 官方 STRING 同源转移、本地 STRING-like 和序列相容性进行综合评分;序列相似性只作为辅助特征,不会单独判定互作。
每个输入框仅接受单条序列或单条 FASTA。自动模式将不少于 90 nt 的 A/C/G/T/U/N 序列按第一阅读框解析为 CDS;其他序列按蛋白解析。模糊 CDS 或仅由这些字母组成的蛋白请显式选择类型。蛋白支持标准氨基酸和 X,CDS 须为 3 的倍数且无内部终止密码子。