Red Sage Omics 丹参基因组信息平台
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中文 EN

丹参转录因子结合位点预测

基于丹参转录因子 binding motif，对提交 DNA 序列或基因上游 4000 bp 预测可能的转录因子结合位点。
257motifs
38157上游序列
4000 bp预生成长度

证据与阈值说明

该页面使用当前丹参 4 kb promoter 序列和 PWM motif 扫描返回候选位点。0.95 是默认的标准化 PWM 分数筛选值；它不是由丹参 ChIP、DAP-seq、EMSA 或报告基因实验校准的 P 值或 FDR 阈值。命中位点支持后续实验设计，但不能单独证明某个 TF 在丹参中发生结合或调控。

按基因 ID 预测上游 4000 bp

示例

提交 DNA 序列预测

示例

查询结果

输入 ID: SmilChr01G000001 ; 解析到 SmilChr01G000001 ; 上游区间: NC_080387.1:43739-47738 ; 阈值: 0.95

129 个命中 下载 TSV

TF ID 新 Gene ID 家族 Motif 起始 终止 链 匹配序列 标准化分数 原始分数 共识序列 URL
SMil_00006887-RA_Salv SmilChr04G000154 M-type_MADS MP00553 59 64 + TGGTGA 1.000 12.53 TGGTGA 来源
SMil_00019943-RA_Salv SmilChr03G001493 ERF MP00027 842 849 + CCGCCGCC 1.000 18.80 CCGCCGCC 来源
SMil_00014538-RA_Salv SmilChr07G003441 NAC MP00108 1027 1035 + TTAAGTAAT 1.000 14.97 TTAAGTAAT 来源
SMil_00007112-RA_Salv SmilChr02G001791 TCP MP00062 1389 1396 + GGGACCAC 1.000 18.10 GGGACCAC 来源
SMil_00007940-RA_Salv SmilChr02G004793 TCP MP00065 1389 1396 + GGGACCAC 1.000 18.27 GGGACCAC 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 2033 2040 + AGTAGTAG 1.000 10.90 TGTAGTAG 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 2048 2055 + GGTAGTAG 0.999 10.88 TGTAGTAG 来源
SMil_00005206-RA_Salv SmilChr04G002625 bZIP MP00642 3954 3960 + TACGTCA 0.998 12.19 TACGTCA 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 2685 2692 + TGAAGTAG 0.997 10.69 TGTAGTAG 来源
SMil_00012149-RA_Salv SmilChr05G000765 ERF MP00623 843 850 + CGCCGCCA 0.995 16.90 CGCCGCCA 来源
SMil_00011217-RA_Salv SmilChr02G004107 SBP MP00664 2666 2672 - CCGTACG 0.993 12.68 GGTACGG 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 2477 2485 - AAGTATCTG 0.988 9.61 AAGATATTT 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 3239 3247 + CAGATACTT 0.988 9.61 AAGATATTT 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 2463 2471 + GAGATACTC 0.987 9.60 AAGATATTT 来源
SMil_00012147-RA_Salv SmilChr05G000767 ERF MP00645 843 850 + CGCCGCCA 0.986 18.08 CGCCGCCA 来源
SMil_00013510-RA_Salv SmilChr05G002244 G2-like MP00378 1099 1106 - AAGATTCC 0.985 11.09 AGAATCTG 来源
SMil_00003982-RA_Salv SmilChr02G002534 TCP MP00169 1386 1397 + GGGGGGACCACA 0.984 20.36 GTTGGGACCACA 来源
SMil_00017002-RA_Salv SmilChr04G000851 G2-like MP00297 3319 3329 + AATAGAATGTT 0.983 12.87 AAAAGAATGTT 来源
SMil_00015103-RA_Salv SmilChr04G002730 CAMTA MP00042 1751 1759 + CCGCGTCGT 0.983 13.86 CCGCGTTAC 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 3414 3421 + ATTAGTAG 0.982 9.59 TGTAGTAG 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 1175 1182 + GTTAGTAG 0.982 9.57 TGTAGTAG 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 980 987 - TTACTACT 0.982 9.56 TGTAGTAG 来源
SMil_00013510-RA_Salv SmilChr05G002244 G2-like MP00378 1682 1689 - CATATTCC 0.981 10.76 AGAATCTG 来源
SMil_00020641-RA_Salv SmilChr01G005665 ERF MP00411 839 849 + CCACCGCCGCC 0.981 21.86 CCGCCACCGCC 来源
SMil_00010780-RA_Salv SmilChr06G001365 SBP MP00307 2664 2674 - GTCCGTACGTC 0.980 12.57 ATTGTACGGAT 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 1495 1502 - TTACTTCA 0.979 9.35 TGTAGTAG 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 2576 2583 + GGAAGTAA 0.978 9.31 TGTAGTAG 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 3293 3301 + TAGATATTT 0.978 9.20 AAGATATTT 来源
SMil_00010780-RA_Salv SmilChr06G001365 SBP MP00307 1091 1101 - TGCCGTACAAG 0.978 12.45 ATTGTACGGAT 来源
SMil_00022202-RA_Salv SmilChr02G005502 bHLH MP00082 1393 1400 + CCACATGG 0.977 13.38 TCACGTGG 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 3696 3703 + TGAAGTGG 0.976 9.15 TGTAGTAG 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 3028 3035 + CGGTCAAA 0.975 12.62 CGGTCAAC 来源
SMil_00018386-RA_Salv SmilChr04G002065 MYB_related MP00631 2509 2516 + CGGATAGC 0.975 11.16 TGGATAAC 来源
SMil_00018386-RA_Salv SmilChr04G002065 MYB_related MP00631 3473 3480 - GCTATCCG 0.975 11.16 TGGATAAC 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 2307 2315 - GAGTATCCC 0.975 9.06 AAGATATTT 来源
SMil_00015434-RA_Salv SmilChr06G001183 TCP MP00326 1386 1398 + GGGGGGACCACAT 0.974 21.17 GTGGGGACCACAA 来源
SMil_00007048-RA_Salv SmilChr02G004600 ARF MP00574 1972 1981 - TTTGTCGCCA 0.974 12.30 ATCCGACAAA 来源
SMil_00026506-RA_Salv SmilChr07G001978 SBP MP00555 2664 2674 - GTCCGTACGTC 0.973 13.77 ATTGTACGGAT 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 2582 2590 - AAGTATCTT 0.972 8.94 AAGATATTT 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 2030 2037 + ACAAGTAG 0.972 8.85 TGTAGTAG 来源
SMil_00019324-RA_Salv SmilChr01G002985 TCP MP00006 1389 1396 + GGGACCAC 0.972 16.47 GGGCCCAC 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2894 2914 - GAAAGAAAAAAGAAGAAAAGG 0.971 15.98 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00011019-RA_Salv SmilChr08G002130 WOX MP00669 1169 1176 - TTGATTGT 0.971 9.58 TCAATCAA 来源
SMil_00005206-RA_Salv SmilChr04G002625 bZIP MP00642 2517 2523 - CGACGTG 0.970 9.73 TACGTCA 来源
SMil_00011019-RA_Salv SmilChr08G002130 WOX MP00669 3958 3965 + TCAATTAA 0.970 9.53 TCAATCAA 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2917 2937 - TGAAGGAGGAAGAAGAAGGAG 0.970 15.70 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00005206-RA_Salv SmilChr04G002625 bZIP MP00642 2669 2675 + TACGTCG 0.968 9.51 TACGTCA 来源
SMil_00024858-RA_Salv SmilChr05G003291 G2-like MP00160 1096 1106 - TACAAGATTCC 0.968 13.30 GGAATCTTCTA 来源
SMil_00017633-RA_Salv SmilChr08G003064 MYB_related MP00338 3294 3305 + AGATATTTGTAT 0.968 12.07 AGATATTTTTTT 来源
SMil_00018448-RA_Salv SmilChr08G002344 AP2 MP00610 2894 2913 + GAAAGAAAAAAGAAGAAAAG 0.967 16.15 AAAAAAAAAAAAAAGAGAAA 来源
SMil_00018448-RA_Salv SmilChr08G002344 AP2 MP00610 3003 3022 + TATAAAGAGAAGAAAAAAAA 0.967 16.11 AAAAAAAAAAAAAAGAGAAA 来源
SMil_00013510-RA_Salv SmilChr05G002244 G2-like MP00378 2999 3006 + GGAATATA 0.967 9.50 AGAATCTG 来源
SMil_00010832-RA_Salv SmilChr07G000228 CPP MP00624 3028 3040 - CGGTCAAATTTGG 0.965 10.38 AAAAATTTTAAAA 来源
SMil_00008639-RA_Salv SmilChr04G002895 MYB_related MP00515 3292 3305 - GTAGATATTTGTAT 0.965 12.21 AAAAAAATATCTTA 来源
SMil_00021663-RA_Salv SmilChr01G000025 SBP MP00633 1092 1100 - GCCGTACAA 0.965 12.55 TTGTACGGA 来源
SMil_00026506-RA_Salv SmilChr07G001978 SBP MP00555 1091 1101 - TGCCGTACAAG 0.963 12.95 ATTGTACGGAT 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 241 248 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 311 318 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 346 353 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 416 423 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 451 458 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 486 493 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 521 528 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 556 563 + TGGTCAGC 0.963 11.63 CGGTCAAC 来源
SMil_00013510-RA_Salv SmilChr05G002244 G2-like MP00378 1879 1886 - ATGATTCC 0.963 9.20 AGAATCTG 来源
SMil_00015103-RA_Salv SmilChr04G002730 CAMTA MP00042 2323 2331 + CCGTGTCGC 0.963 12.59 CCGCGTTAC 来源
SMil_00018448-RA_Salv SmilChr08G002344 AP2 MP00610 2895 2914 + AAAGAAAAAAGAAGAAAAGG 0.962 15.30 AAAAAAAAAAAAAAGAGAAA 来源
SMil_00014051-RA_Salv SmilChr08G002286 HD-ZIP MP00477 1797 1806 + CACAATCATG 0.962 11.13 ACTAATCATT 来源
SMil_00016341-RA_Salv SmilChr05G001395 WRKY MP00071 571 578 - GTTGACTC 0.962 11.54 CGGTCAAC 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2939 2959 - TGAAAGTGAAAGAAGAAGGAG 0.962 14.22 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00022800-RA_Salv SmilChr02G002327 Dof MP00405 1373 1383 - CCTACTTTATG 0.962 10.47 CAAAAAGTTAA 来源
SMil_00005062-RA_Salv SmilChr04G002704 ERF MP00026 843 852 + CGCCGCCAAG 0.962 13.63 CACCGACCAT 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 1027 1034 + TTAAGTAA 0.961 8.05 TGTAGTAG 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 3073 3082 - AATTCAAAAT 0.961 9.40 AATTTGAATT 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 3462 3471 - AATTCAAAAT 0.961 9.40 AATTTGAATT 来源
SMil_00021741-RA_Salv SmilChr01G004920 MYB_related MP00607 48 56 - AGACCTAGC 0.961 10.60 TTTAGGTTG 来源
SMil_00011217-RA_Salv SmilChr02G004107 SBP MP00664 1093 1099 - CCGTACA 0.961 11.31 GGTACGG 来源
SMil_00021741-RA_Salv SmilChr01G004920 MYB_related MP00607 663 671 - AAACCTAAA 0.961 10.58 TTTAGGTTG 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2895 2915 - AAAGAAAAAAGAAGAAAAGGC 0.961 14.00 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 1374 1381 - CTACTTTA 0.961 8.00 TGTAGTAG 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 983 990 - CTACTCCA 0.961 7.98 TGTAGTAG 来源
SMil_00022800-RA_Salv SmilChr02G002327 Dof MP00405 1186 1196 - TCCCCTTTTCT 0.960 10.35 CAAAAAGTTAA 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 201 208 + GAAAGTAG 0.960 7.96 TGTAGTAG 来源
SMil_00025905-RA_Salv SmilChr05G003285 RAV MP00024 3324 3331 + AATGTTGT 0.960 9.88 TATGTTGC 来源
SMil_00006712-RA_Salv SmilChr05G002364 WRKY MP00069 3056 3063 + AGTCAAAG 0.960 12.08 AGTCAACG 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2982 3002 - AGAAGAAGGAGGAAGATGGAA 0.959 13.69 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00005206-RA_Salv SmilChr04G002625 bZIP MP00642 2469 2475 + CTCGTCA 0.959 8.71 TACGTCA 来源
SMil_00025905-RA_Salv SmilChr05G003285 RAV MP00024 3711 3718 - ACAACATC 0.959 9.77 TATGTTGC 来源
SMil_00007655-RA_Salv SmilChr04G003745 C2H2 MP00416 3362 3369 + TGAAGTGA 0.958 7.82 TGTAGTAG 来源
SMil_00021489-RA_Salv SmilChr05G000830 NAC MP00058 796 803 + CACGCCAT 0.957 10.19 TACGTAAC 来源
SMil_00002845-RA_Salv SmilChr02G005238 SBP MP00634 2664 2673 - GTCCGTACGT 0.957 13.31 TTGTACGGAC 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 631 639 - AAAAATCTC 0.957 8.27 AAGATATTT 来源
SMil_00014051-RA_Salv SmilChr08G002286 HD-ZIP MP00477 3653 3662 - CATGATTGTT 0.957 10.67 ACTAATCATT 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2976 2996 - TGAGGAAGAAGAAGGAGGAAG 0.957 13.25 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00002986-RA_Salv SmilChr02G002162 LBD MP00128 183 197 + GCGAAATAGGCGGAG 0.957 17.53 CCGAAAAAATCGGAG 来源
SMil_00021663-RA_Salv SmilChr01G000025 SBP MP00633 2665 2673 - TCCGTACGT 0.957 12.21 TTGTACGGA 来源
SMil_00005206-RA_Salv SmilChr04G002625 bZIP MP00642 1994 2000 - TGACGAA 0.957 8.49 TACGTCA 来源
SMil_00014973-RA_Salv SmilChr08G001589 CPP MP00370 3069 3083 - TTCAAATTCAAAATT 0.957 12.08 ATTTTAAAATTTAAA 来源
SMil_00012149-RA_Salv SmilChr05G000765 ERF MP00623 2644 2651 + CGCCGTCG 0.957 14.37 CGCCGCCA 来源
SMil_00002627-RA_Salv SmilChr04G003980 MYB_related MP00654 3794 3802 - AAGTATCCA 0.956 8.23 AAGATATTT 来源
SMil_00015103-RA_Salv SmilChr04G002730 CAMTA MP00042 2236 2244 + CCGCGTGTA 0.956 12.17 CCGCGTTAC 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2975 2995 - GTGAGGAAGAAGAAGGAGGAA 0.956 13.04 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00018448-RA_Salv SmilChr08G002344 AP2 MP00610 2892 2911 + TCGAAAGAAAAAAGAAGAAA 0.955 14.01 AAAAAAAAAAAAAAGAGAAA 来源
SMil_00007048-RA_Salv SmilChr02G004600 ARF MP00574 1323 1332 - TTTGTCTGAG 0.955 10.60 ATCCGACAAA 来源
SMil_00014973-RA_Salv SmilChr08G001589 CPP MP00370 1496 1510 + TACTTCAAATTTAAA 0.955 11.87 ATTTTAAAATTTAAA 来源
SMil_00017002-RA_Salv SmilChr04G000851 G2-like MP00297 1259 1269 - AAAATTCTCCA 0.954 10.37 AAAAGAATGTT 来源
SMil_00013392-RA_Salv SmilChr02G003833 MYB MP00476 3181 3191 - TGCATCGGTTA 0.954 9.09 TAACCGTAATA 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 1478 1487 + AATTTAAATT 0.954 8.78 AATTTGAATT 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 1478 1487 - AATTTAAATT 0.954 8.78 AATTTGAATT 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 1503 1512 + AATTTAAATT 0.954 8.78 AATTTGAATT 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 1503 1512 - AATTTAAATT 0.954 8.78 AATTTGAATT 来源
SMil_00013392-RA_Salv SmilChr02G003833 MYB MP00476 2198 2208 + CAACGGCCTCC 0.953 8.99 TAACCGTAATA 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 3007 3027 - AAGAGAAGAAAAAAAATCGAA 0.953 12.50 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00007048-RA_Salv SmilChr02G004600 ARF MP00574 601 610 - GATGTCTGCT 0.953 10.41 ATCCGACAAA 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 2144 2153 + TGTTCGAACC 0.953 8.68 AATTTGAATT 来源
SMil_00005671-RA_Salv SmilChr01G002667 CPP MP00045 2144 2153 - TGTTCGAACC 0.953 8.68 AATTTGAATT 来源
SMil_00005062-RA_Salv SmilChr04G002704 ERF MP00026 3972 3981 - TTGGGCGGCC 0.953 13.05 CACCGACCAT 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 3000 3020 - GAATATAAAGAGAAGAAAAAA 0.953 12.39 TTTTTTTTTTTTTTTTTTTTT 来源
SMil_00025905-RA_Salv SmilChr05G003285 RAV MP00024 971 978 - CCAACAGT 0.952 9.11 TATGTTGC 来源
SMil_00013510-RA_Salv SmilChr05G002244 G2-like MP00378 64 71 + AGAATAAG 0.951 8.18 AGAATCTG 来源
SMil_00019943-RA_Salv SmilChr03G001493 ERF MP00027 3975 3982 - GGCGGCCC 0.951 15.07 CCGCCGCC 来源
SMil_00021489-RA_Salv SmilChr05G000830 NAC MP00058 1090 1097 - GTGCCGTA 0.951 9.66 TACGTAAC 来源
SMil_00017546-RA_Salv SmilChr01G000377 MYB MP00490 250 260 - CTGGCAGTTAT 0.950 9.78 ATAACCGAATT 来源
SMil_00017546-RA_Salv SmilChr01G000377 MYB MP00490 355 365 - CTGGCAGTTAT 0.950 9.78 ATAACCGAATT 来源
SMil_00017546-RA_Salv SmilChr01G000377 MYB MP00490 460 470 - CTGGCAGTTAT 0.950 9.78 ATAACCGAATT 来源
SMil_00017546-RA_Salv SmilChr01G000377 MYB MP00490 495 505 - CTGGCAGTTAT 0.950 9.78 ATAACCGAATT 来源
SMil_00017546-RA_Salv SmilChr01G000377 MYB MP00490 530 540 - CTGGCAGTTAT 0.950 9.78 ATAACCGAATT 来源
SMil_00021741-RA_Salv SmilChr01G004920 MYB_related MP00607 2551 2559 - CGACCTATT 0.950 9.49 TTTAGGTTG 来源
SMil_00027050-RA_Salv SmilChr01G002558 MIKC_MADS MP00076 2924 2944 - GGAAGAAGAAGGAGGTGAAAG 0.950 11.90 TTTTTTTTTTTTTTTTTTTTT 来源